Protein–RNA interactions for Protein: Q8BR65

Suds3, Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3Q8BR65 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
Suds3Q8BR65 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Suds3Q8BR65 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Suds3Q8BR65 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Suds3Q8BR65 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Suds3Q8BR65 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Suds3Q8BR65 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Suds3Q8BR65 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC21.17■□□□□ 0.98
Suds3Q8BR65 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC21.17■□□□□ 0.98
Suds3Q8BR65 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Suds3Q8BR65 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Suds3Q8BR65 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Suds3Q8BR65 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Suds3Q8BR65 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Suds3Q8BR65 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Suds3Q8BR65 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Suds3Q8BR65 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Suds3Q8BR65 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Suds3Q8BR65 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Suds3Q8BR65 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Suds3Q8BR65 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Suds3Q8BR65 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Suds3Q8BR65 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Suds3Q8BR65 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Suds3Q8BR65 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Suds3Q8BR65 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Suds3Q8BR65 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Suds3Q8BR65 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Suds3Q8BR65 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Suds3Q8BR65 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Suds3Q8BR65 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Suds3Q8BR65 Gm37415-201ENSMUST00000192265 2054 ntBASIC21.14■□□□□ 0.97
Suds3Q8BR65 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Suds3Q8BR65 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Suds3Q8BR65 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Suds3Q8BR65 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Suds3Q8BR65 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Suds3Q8BR65 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Suds3Q8BR65 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Suds3Q8BR65 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Suds3Q8BR65 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Suds3Q8BR65 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Suds3Q8BR65 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Suds3Q8BR65 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Suds3Q8BR65 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Suds3Q8BR65 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Suds3Q8BR65 Gm42418-201ENSMUST00000182010 1831 ntBASIC21.12■□□□□ 0.97
Suds3Q8BR65 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Suds3Q8BR65 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Suds3Q8BR65 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Suds3Q8BR65 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Suds3Q8BR65 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC21.12■□□□□ 0.97
Suds3Q8BR65 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Suds3Q8BR65 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Suds3Q8BR65 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Suds3Q8BR65 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Suds3Q8BR65 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC21.11■□□□□ 0.97
Suds3Q8BR65 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Suds3Q8BR65 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
Suds3Q8BR65 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Suds3Q8BR65 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Suds3Q8BR65 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
Suds3Q8BR65 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Suds3Q8BR65 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Suds3Q8BR65 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Suds3Q8BR65 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Suds3Q8BR65 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Suds3Q8BR65 Gm10232-201ENSMUST00000089221 720 ntBASIC21.09■□□□□ 0.97
Suds3Q8BR65 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Suds3Q8BR65 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Suds3Q8BR65 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.97
Suds3Q8BR65 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Suds3Q8BR65 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Suds3Q8BR65 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Suds3Q8BR65 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Suds3Q8BR65 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Suds3Q8BR65 AC158990.1-201ENSMUST00000221450 2016 ntBASIC21.07■□□□□ 0.96
Suds3Q8BR65 Gm28536-201ENSMUST00000190971 1317 ntBASIC21.07■□□□□ 0.96
Suds3Q8BR65 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC21.07■□□□□ 0.96
Suds3Q8BR65 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Suds3Q8BR65 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC21.07■□□□□ 0.96
Suds3Q8BR65 Gm42501-201ENSMUST00000200220 1026 ntBASIC21.07■□□□□ 0.96
Suds3Q8BR65 Rps24-207ENSMUST00000224568 714 ntBASIC21.07■□□□□ 0.96
Suds3Q8BR65 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Suds3Q8BR65 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Suds3Q8BR65 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Suds3Q8BR65 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Suds3Q8BR65 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC21.07■□□□□ 0.96
Suds3Q8BR65 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Suds3Q8BR65 Gm18755-201ENSMUST00000218030 1099 ntBASIC21.06■□□□□ 0.96
Suds3Q8BR65 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Suds3Q8BR65 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Suds3Q8BR65 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Suds3Q8BR65 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Suds3Q8BR65 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Suds3Q8BR65 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Suds3Q8BR65 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Suds3Q8BR65 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Suds3Q8BR65 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Suds3Q8BR65 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms