Protein–RNA interactions for Protein: Q8BR37

Nhlrc1, E3 ubiquitin-protein ligase NHLRC1, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc1Q8BR37 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Nhlrc1Q8BR37 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC16.04■□□□□ 0.16
Nhlrc1Q8BR37 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC16.04■□□□□ 0.16
Nhlrc1Q8BR37 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nhlrc1Q8BR37 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Nhlrc1Q8BR37 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nhlrc1Q8BR37 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nhlrc1Q8BR37 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nhlrc1Q8BR37 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nhlrc1Q8BR37 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC16.03■□□□□ 0.16
Nhlrc1Q8BR37 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC16.03■□□□□ 0.16
Nhlrc1Q8BR37 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nhlrc1Q8BR37 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC16.03■□□□□ 0.16
Nhlrc1Q8BR37 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC16.03■□□□□ 0.16
Nhlrc1Q8BR37 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Nhlrc1Q8BR37 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nhlrc1Q8BR37 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nhlrc1Q8BR37 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nhlrc1Q8BR37 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nhlrc1Q8BR37 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC16.02■□□□□ 0.16
Nhlrc1Q8BR37 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nhlrc1Q8BR37 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC16.02■□□□□ 0.15
Nhlrc1Q8BR37 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Nhlrc1Q8BR37 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Nhlrc1Q8BR37 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Nhlrc1Q8BR37 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nhlrc1Q8BR37 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nhlrc1Q8BR37 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nhlrc1Q8BR37 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Nhlrc1Q8BR37 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nhlrc1Q8BR37 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC16.01■□□□□ 0.15
Nhlrc1Q8BR37 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Nhlrc1Q8BR37 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nhlrc1Q8BR37 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nhlrc1Q8BR37 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nhlrc1Q8BR37 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC16■□□□□ 0.15
Nhlrc1Q8BR37 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC16■□□□□ 0.15
Nhlrc1Q8BR37 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
Nhlrc1Q8BR37 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Nhlrc1Q8BR37 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Nhlrc1Q8BR37 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nhlrc1Q8BR37 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nhlrc1Q8BR37 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
Nhlrc1Q8BR37 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC16■□□□□ 0.15
Nhlrc1Q8BR37 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC16■□□□□ 0.15
Nhlrc1Q8BR37 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nhlrc1Q8BR37 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Nhlrc1Q8BR37 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nhlrc1Q8BR37 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC15.99■□□□□ 0.15
Nhlrc1Q8BR37 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Nhlrc1Q8BR37 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nhlrc1Q8BR37 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC15.99■□□□□ 0.15
Nhlrc1Q8BR37 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Nhlrc1Q8BR37 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nhlrc1Q8BR37 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nhlrc1Q8BR37 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nhlrc1Q8BR37 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nhlrc1Q8BR37 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nhlrc1Q8BR37 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nhlrc1Q8BR37 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Nhlrc1Q8BR37 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC15.98■□□□□ 0.15
Nhlrc1Q8BR37 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nhlrc1Q8BR37 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nhlrc1Q8BR37 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nhlrc1Q8BR37 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nhlrc1Q8BR37 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nhlrc1Q8BR37 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
Nhlrc1Q8BR37 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Nhlrc1Q8BR37 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Nhlrc1Q8BR37 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Nhlrc1Q8BR37 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nhlrc1Q8BR37 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nhlrc1Q8BR37 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Nhlrc1Q8BR37 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Nhlrc1Q8BR37 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nhlrc1Q8BR37 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Nhlrc1Q8BR37 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nhlrc1Q8BR37 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Nhlrc1Q8BR37 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Nhlrc1Q8BR37 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nhlrc1Q8BR37 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nhlrc1Q8BR37 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nhlrc1Q8BR37 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nhlrc1Q8BR37 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nhlrc1Q8BR37 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nhlrc1Q8BR37 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nhlrc1Q8BR37 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nhlrc1Q8BR37 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nhlrc1Q8BR37 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Nhlrc1Q8BR37 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Nhlrc1Q8BR37 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Nhlrc1Q8BR37 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Nhlrc1Q8BR37 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Nhlrc1Q8BR37 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Nhlrc1Q8BR37 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Nhlrc1Q8BR37 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Nhlrc1Q8BR37 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
Nhlrc1Q8BR37 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Nhlrc1Q8BR37 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC15.95■□□□□ 0.14
Nhlrc1Q8BR37 Gm27454-201ENSMUST00000185090 204 ntBASIC15.95■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms