Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smco3Q8BQM7 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smco3Q8BQM7 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smco3Q8BQM7 AC154454.1-201ENSMUST00000225253 216 ntBASIC17.06■□□□□ 0.32
Smco3Q8BQM7 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
Smco3Q8BQM7 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smco3Q8BQM7 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Smco3Q8BQM7 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smco3Q8BQM7 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
Smco3Q8BQM7 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Smco3Q8BQM7 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smco3Q8BQM7 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smco3Q8BQM7 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smco3Q8BQM7 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smco3Q8BQM7 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Smco3Q8BQM7 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smco3Q8BQM7 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smco3Q8BQM7 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Smco3Q8BQM7 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC17.05■□□□□ 0.32
Smco3Q8BQM7 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smco3Q8BQM7 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smco3Q8BQM7 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smco3Q8BQM7 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smco3Q8BQM7 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smco3Q8BQM7 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smco3Q8BQM7 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Smco3Q8BQM7 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smco3Q8BQM7 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smco3Q8BQM7 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC17.04■□□□□ 0.32
Smco3Q8BQM7 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Smco3Q8BQM7 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smco3Q8BQM7 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smco3Q8BQM7 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Smco3Q8BQM7 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smco3Q8BQM7 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smco3Q8BQM7 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Smco3Q8BQM7 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smco3Q8BQM7 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC17.03■□□□□ 0.32
Smco3Q8BQM7 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smco3Q8BQM7 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Smco3Q8BQM7 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smco3Q8BQM7 Gm45364-201ENSMUST00000210883 159 ntBASIC17.03■□□□□ 0.32
Smco3Q8BQM7 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Smco3Q8BQM7 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Smco3Q8BQM7 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smco3Q8BQM7 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.03■□□□□ 0.32
Smco3Q8BQM7 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smco3Q8BQM7 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smco3Q8BQM7 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smco3Q8BQM7 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smco3Q8BQM7 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Smco3Q8BQM7 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Smco3Q8BQM7 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC17.02■□□□□ 0.31
Smco3Q8BQM7 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Smco3Q8BQM7 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smco3Q8BQM7 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smco3Q8BQM7 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Smco3Q8BQM7 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smco3Q8BQM7 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Smco3Q8BQM7 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Smco3Q8BQM7 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smco3Q8BQM7 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smco3Q8BQM7 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smco3Q8BQM7 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smco3Q8BQM7 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC16.99■□□□□ 0.31
Smco3Q8BQM7 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Smco3Q8BQM7 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Smco3Q8BQM7 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Smco3Q8BQM7 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Smco3Q8BQM7 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smco3Q8BQM7 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smco3Q8BQM7 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Smco3Q8BQM7 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smco3Q8BQM7 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smco3Q8BQM7 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smco3Q8BQM7 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smco3Q8BQM7 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Smco3Q8BQM7 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC16.98■□□□□ 0.31
Smco3Q8BQM7 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Smco3Q8BQM7 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smco3Q8BQM7 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC16.98■□□□□ 0.31
Smco3Q8BQM7 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Smco3Q8BQM7 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smco3Q8BQM7 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smco3Q8BQM7 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smco3Q8BQM7 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Smco3Q8BQM7 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smco3Q8BQM7 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smco3Q8BQM7 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smco3Q8BQM7 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smco3Q8BQM7 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smco3Q8BQM7 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Smco3Q8BQM7 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smco3Q8BQM7 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smco3Q8BQM7 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smco3Q8BQM7 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smco3Q8BQM7 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Smco3Q8BQM7 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Smco3Q8BQM7 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smco3Q8BQM7 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms