Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.18■□□□□ 0.82
Pcdh20Q8BIZ0 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
Pcdh20Q8BIZ0 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdh20Q8BIZ0 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdh20Q8BIZ0 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdh20Q8BIZ0 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdh20Q8BIZ0 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Pcdh20Q8BIZ0 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdh20Q8BIZ0 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdh20Q8BIZ0 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdh20Q8BIZ0 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Pcdh20Q8BIZ0 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdh20Q8BIZ0 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdh20Q8BIZ0 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdh20Q8BIZ0 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.16■□□□□ 0.82
Pcdh20Q8BIZ0 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.16■□□□□ 0.82
Pcdh20Q8BIZ0 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdh20Q8BIZ0 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdh20Q8BIZ0 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdh20Q8BIZ0 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Pcdh20Q8BIZ0 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Pcdh20Q8BIZ0 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdh20Q8BIZ0 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdh20Q8BIZ0 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.15■□□□□ 0.82
Pcdh20Q8BIZ0 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdh20Q8BIZ0 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdh20Q8BIZ0 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdh20Q8BIZ0 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Pcdh20Q8BIZ0 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
Pcdh20Q8BIZ0 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.14■□□□□ 0.82
Pcdh20Q8BIZ0 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
Pcdh20Q8BIZ0 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdh20Q8BIZ0 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdh20Q8BIZ0 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdh20Q8BIZ0 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdh20Q8BIZ0 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.14■□□□□ 0.81
Pcdh20Q8BIZ0 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdh20Q8BIZ0 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdh20Q8BIZ0 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdh20Q8BIZ0 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdh20Q8BIZ0 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Pcdh20Q8BIZ0 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdh20Q8BIZ0 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
Pcdh20Q8BIZ0 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdh20Q8BIZ0 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Pcdh20Q8BIZ0 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdh20Q8BIZ0 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdh20Q8BIZ0 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdh20Q8BIZ0 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdh20Q8BIZ0 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Pcdh20Q8BIZ0 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdh20Q8BIZ0 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdh20Q8BIZ0 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.12■□□□□ 0.81
Pcdh20Q8BIZ0 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdh20Q8BIZ0 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdh20Q8BIZ0 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Pcdh20Q8BIZ0 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdh20Q8BIZ0 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdh20Q8BIZ0 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdh20Q8BIZ0 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.11■□□□□ 0.81
Pcdh20Q8BIZ0 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.11■□□□□ 0.81
Pcdh20Q8BIZ0 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.11■□□□□ 0.81
Pcdh20Q8BIZ0 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdh20Q8BIZ0 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdh20Q8BIZ0 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdh20Q8BIZ0 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdh20Q8BIZ0 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdh20Q8BIZ0 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.09■□□□□ 0.81
Pcdh20Q8BIZ0 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdh20Q8BIZ0 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdh20Q8BIZ0 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdh20Q8BIZ0 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdh20Q8BIZ0 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdh20Q8BIZ0 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.09■□□□□ 0.81
Pcdh20Q8BIZ0 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdh20Q8BIZ0 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Pcdh20Q8BIZ0 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Pcdh20Q8BIZ0 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdh20Q8BIZ0 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdh20Q8BIZ0 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Pcdh20Q8BIZ0 Gm15820-201ENSMUST00000201566 728 ntBASIC20.08■□□□□ 0.81
Pcdh20Q8BIZ0 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.08■□□□□ 0.81
Pcdh20Q8BIZ0 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.8
Pcdh20Q8BIZ0 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pcdh20Q8BIZ0 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pcdh20Q8BIZ0 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdh20Q8BIZ0 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdh20Q8BIZ0 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdh20Q8BIZ0 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdh20Q8BIZ0 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Pcdh20Q8BIZ0 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdh20Q8BIZ0 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdh20Q8BIZ0 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Pcdh20Q8BIZ0 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdh20Q8BIZ0 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Pcdh20Q8BIZ0 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdh20Q8BIZ0 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdh20Q8BIZ0 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdh20Q8BIZ0 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdh20Q8BIZ0 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms