Protein–RNA interactions for Protein: Q8BHK2

Scn3b, Sodium channel subunit beta-3, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3bQ8BHK2 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Scn3bQ8BHK2 Pkd1-207ENSMUST00000228550 1050 ntBASIC19.27■□□□□ 0.68
Scn3bQ8BHK2 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Scn3bQ8BHK2 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Scn3bQ8BHK2 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Scn3bQ8BHK2 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Scn3bQ8BHK2 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Scn3bQ8BHK2 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Scn3bQ8BHK2 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Scn3bQ8BHK2 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scn3bQ8BHK2 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Scn3bQ8BHK2 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Scn3bQ8BHK2 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19.26■□□□□ 0.67
Scn3bQ8BHK2 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.26■□□□□ 0.67
Scn3bQ8BHK2 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scn3bQ8BHK2 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.26■□□□□ 0.67
Scn3bQ8BHK2 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scn3bQ8BHK2 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scn3bQ8BHK2 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scn3bQ8BHK2 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scn3bQ8BHK2 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scn3bQ8BHK2 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.25■□□□□ 0.67
Scn3bQ8BHK2 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Scn3bQ8BHK2 Gm8503-201ENSMUST00000118131 455 ntBASIC19.25■□□□□ 0.67
Scn3bQ8BHK2 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scn3bQ8BHK2 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Scn3bQ8BHK2 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scn3bQ8BHK2 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Scn3bQ8BHK2 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scn3bQ8BHK2 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scn3bQ8BHK2 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Scn3bQ8BHK2 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scn3bQ8BHK2 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scn3bQ8BHK2 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Scn3bQ8BHK2 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scn3bQ8BHK2 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scn3bQ8BHK2 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Scn3bQ8BHK2 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC19.24■□□□□ 0.67
Scn3bQ8BHK2 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Scn3bQ8BHK2 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scn3bQ8BHK2 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scn3bQ8BHK2 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scn3bQ8BHK2 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scn3bQ8BHK2 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scn3bQ8BHK2 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Scn3bQ8BHK2 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Scn3bQ8BHK2 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scn3bQ8BHK2 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scn3bQ8BHK2 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scn3bQ8BHK2 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scn3bQ8BHK2 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.23■□□□□ 0.67
Scn3bQ8BHK2 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
Scn3bQ8BHK2 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scn3bQ8BHK2 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scn3bQ8BHK2 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Scn3bQ8BHK2 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Scn3bQ8BHK2 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Scn3bQ8BHK2 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Scn3bQ8BHK2 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Scn3bQ8BHK2 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Scn3bQ8BHK2 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Scn3bQ8BHK2 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.22■□□□□ 0.67
Scn3bQ8BHK2 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Scn3bQ8BHK2 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Scn3bQ8BHK2 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Scn3bQ8BHK2 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Scn3bQ8BHK2 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Scn3bQ8BHK2 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Scn3bQ8BHK2 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Scn3bQ8BHK2 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scn3bQ8BHK2 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scn3bQ8BHK2 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Scn3bQ8BHK2 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Scn3bQ8BHK2 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scn3bQ8BHK2 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scn3bQ8BHK2 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scn3bQ8BHK2 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Scn3bQ8BHK2 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scn3bQ8BHK2 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
Scn3bQ8BHK2 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scn3bQ8BHK2 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scn3bQ8BHK2 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Scn3bQ8BHK2 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Scn3bQ8BHK2 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scn3bQ8BHK2 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scn3bQ8BHK2 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Scn3bQ8BHK2 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scn3bQ8BHK2 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scn3bQ8BHK2 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scn3bQ8BHK2 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scn3bQ8BHK2 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scn3bQ8BHK2 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scn3bQ8BHK2 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scn3bQ8BHK2 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Scn3bQ8BHK2 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Scn3bQ8BHK2 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Scn3bQ8BHK2 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scn3bQ8BHK2 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scn3bQ8BHK2 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Scn3bQ8BHK2 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms