Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.93■□□□□ 0.78
Trim36Q80WG7 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim36Q80WG7 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim36Q80WG7 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim36Q80WG7 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim36Q80WG7 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim36Q80WG7 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim36Q80WG7 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim36Q80WG7 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim36Q80WG7 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim36Q80WG7 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim36Q80WG7 Gm43566-201ENSMUST00000196851 808 ntBASIC19.92■□□□□ 0.78
Trim36Q80WG7 Gm45444-201ENSMUST00000211394 898 ntBASIC19.92■□□□□ 0.78
Trim36Q80WG7 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Trim36Q80WG7 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim36Q80WG7 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Trim36Q80WG7 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim36Q80WG7 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Trim36Q80WG7 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Trim36Q80WG7 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim36Q80WG7 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim36Q80WG7 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
Trim36Q80WG7 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim36Q80WG7 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim36Q80WG7 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim36Q80WG7 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19.91■□□□□ 0.78
Trim36Q80WG7 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim36Q80WG7 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim36Q80WG7 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim36Q80WG7 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
Trim36Q80WG7 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Trim36Q80WG7 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim36Q80WG7 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim36Q80WG7 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim36Q80WG7 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.9■□□□□ 0.78
Trim36Q80WG7 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Trim36Q80WG7 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim36Q80WG7 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim36Q80WG7 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.89■□□□□ 0.77
Trim36Q80WG7 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.77
Trim36Q80WG7 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim36Q80WG7 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim36Q80WG7 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim36Q80WG7 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Trim36Q80WG7 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim36Q80WG7 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.88■□□□□ 0.77
Trim36Q80WG7 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim36Q80WG7 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Trim36Q80WG7 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC19.88■□□□□ 0.77
Trim36Q80WG7 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Trim36Q80WG7 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Trim36Q80WG7 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Trim36Q80WG7 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.88■□□□□ 0.77
Trim36Q80WG7 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC19.88■□□□□ 0.77
Trim36Q80WG7 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim36Q80WG7 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim36Q80WG7 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
Trim36Q80WG7 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim36Q80WG7 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim36Q80WG7 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Trim36Q80WG7 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim36Q80WG7 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Trim36Q80WG7 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim36Q80WG7 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim36Q80WG7 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim36Q80WG7 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim36Q80WG7 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Trim36Q80WG7 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim36Q80WG7 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.86■□□□□ 0.77
Trim36Q80WG7 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Trim36Q80WG7 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Trim36Q80WG7 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim36Q80WG7 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim36Q80WG7 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim36Q80WG7 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim36Q80WG7 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19.85■□□□□ 0.77
Trim36Q80WG7 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim36Q80WG7 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim36Q80WG7 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim36Q80WG7 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim36Q80WG7 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim36Q80WG7 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trim36Q80WG7 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trim36Q80WG7 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim36Q80WG7 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim36Q80WG7 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.84■□□□□ 0.77
Trim36Q80WG7 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim36Q80WG7 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim36Q80WG7 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Trim36Q80WG7 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Trim36Q80WG7 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trim36Q80WG7 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trim36Q80WG7 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Trim36Q80WG7 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trim36Q80WG7 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim36Q80WG7 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim36Q80WG7 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim36Q80WG7 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim36Q80WG7 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim36Q80WG7 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 126.6 ms