Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Trim62Q80V85 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Trim62Q80V85 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Trim62Q80V85 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trim62Q80V85 Gm5913-201ENSMUST00000119397 1399 ntBASIC21.56■■□□□ 1.04
Trim62Q80V85 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trim62Q80V85 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Trim62Q80V85 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trim62Q80V85 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trim62Q80V85 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trim62Q80V85 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trim62Q80V85 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trim62Q80V85 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC21.55■■□□□ 1.04
Trim62Q80V85 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trim62Q80V85 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trim62Q80V85 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trim62Q80V85 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trim62Q80V85 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Trim62Q80V85 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trim62Q80V85 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trim62Q80V85 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Trim62Q80V85 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trim62Q80V85 Gm44949-201ENSMUST00000206423 1450 ntBASIC21.53■■□□□ 1.04
Trim62Q80V85 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trim62Q80V85 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC21.53■■□□□ 1.04
Trim62Q80V85 Gm22238-201ENSMUST00000175222 88 ntBASIC21.53■■□□□ 1.04
Trim62Q80V85 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trim62Q80V85 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trim62Q80V85 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trim62Q80V85 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trim62Q80V85 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trim62Q80V85 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trim62Q80V85 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
Trim62Q80V85 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trim62Q80V85 Gm4430-201ENSMUST00000192413 1943 ntBASIC21.52■■□□□ 1.04
Trim62Q80V85 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
Trim62Q80V85 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
Trim62Q80V85 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Trim62Q80V85 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Trim62Q80V85 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trim62Q80V85 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trim62Q80V85 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trim62Q80V85 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC21.51■■□□□ 1.03
Trim62Q80V85 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Trim62Q80V85 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC21.51■■□□□ 1.03
Trim62Q80V85 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC21.51■■□□□ 1.03
Trim62Q80V85 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trim62Q80V85 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trim62Q80V85 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trim62Q80V85 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC21.5■■□□□ 1.03
Trim62Q80V85 Kdm3b-204ENSMUST00000224715 2032 ntBASIC21.5■■□□□ 1.03
Trim62Q80V85 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trim62Q80V85 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trim62Q80V85 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Trim62Q80V85 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC21.49■■□□□ 1.03
Trim62Q80V85 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trim62Q80V85 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trim62Q80V85 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trim62Q80V85 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC21.49■■□□□ 1.03
Trim62Q80V85 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trim62Q80V85 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Trim62Q80V85 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Trim62Q80V85 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC21.48■■□□□ 1.03
Trim62Q80V85 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trim62Q80V85 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC21.48■■□□□ 1.03
Trim62Q80V85 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trim62Q80V85 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC21.48■■□□□ 1.03
Trim62Q80V85 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Trim62Q80V85 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Trim62Q80V85 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.48■■□□□ 1.03
Trim62Q80V85 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Trim62Q80V85 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC21.48■■□□□ 1.03
Trim62Q80V85 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC21.48■■□□□ 1.03
Trim62Q80V85 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trim62Q80V85 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.47■■□□□ 1.03
Trim62Q80V85 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trim62Q80V85 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Trim62Q80V85 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC21.47■■□□□ 1.03
Trim62Q80V85 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC21.47■■□□□ 1.03
Trim62Q80V85 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trim62Q80V85 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Trim62Q80V85 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Trim62Q80V85 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Trim62Q80V85 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.46■■□□□ 1.03
Trim62Q80V85 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC21.46■■□□□ 1.03
Trim62Q80V85 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC21.46■■□□□ 1.03
Trim62Q80V85 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC21.46■■□□□ 1.03
Trim62Q80V85 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trim62Q80V85 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Trim62Q80V85 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trim62Q80V85 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trim62Q80V85 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Trim62Q80V85 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trim62Q80V85 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.02
Trim62Q80V85 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trim62Q80V85 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trim62Q80V85 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trim62Q80V85 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trim62Q80V85 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Trim62Q80V85 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms