Protein–RNA interactions for Protein: Q6IE28

Gm5416, Predicted gene 5416, mousemouse

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5416Q6IE28 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gm5416Q6IE28 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.34■□□□□ 0.69
Gm5416Q6IE28 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gm5416Q6IE28 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC19.34■□□□□ 0.69
Gm5416Q6IE28 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
Gm5416Q6IE28 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Gm5416Q6IE28 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Gm5416Q6IE28 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Gm5416Q6IE28 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Gm5416Q6IE28 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Gm5416Q6IE28 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.33■□□□□ 0.68
Gm5416Q6IE28 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Gm5416Q6IE28 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Gm5416Q6IE28 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Gm5416Q6IE28 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Gm5416Q6IE28 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Gm5416Q6IE28 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.32■□□□□ 0.68
Gm5416Q6IE28 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.32■□□□□ 0.68
Gm5416Q6IE28 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm5416Q6IE28 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm5416Q6IE28 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.32■□□□□ 0.68
Gm5416Q6IE28 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Gm5416Q6IE28 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm5416Q6IE28 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm5416Q6IE28 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.32■□□□□ 0.68
Gm5416Q6IE28 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Gm5416Q6IE28 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm5416Q6IE28 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm5416Q6IE28 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.31■□□□□ 0.68
Gm5416Q6IE28 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm5416Q6IE28 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm5416Q6IE28 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm5416Q6IE28 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Gm5416Q6IE28 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Gm5416Q6IE28 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.3■□□□□ 0.68
Gm5416Q6IE28 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm5416Q6IE28 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Gm5416Q6IE28 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm5416Q6IE28 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Gm5416Q6IE28 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm5416Q6IE28 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Gm5416Q6IE28 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm5416Q6IE28 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Gm5416Q6IE28 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Gm5416Q6IE28 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm5416Q6IE28 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm5416Q6IE28 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm5416Q6IE28 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gm5416Q6IE28 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Gm5416Q6IE28 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Gm5416Q6IE28 Gm13238-201ENSMUST00000117655 780 ntBASIC19.28■□□□□ 0.68
Gm5416Q6IE28 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gm5416Q6IE28 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gm5416Q6IE28 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Gm5416Q6IE28 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gm5416Q6IE28 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gm5416Q6IE28 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Gm5416Q6IE28 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gm5416Q6IE28 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Gm5416Q6IE28 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Gm5416Q6IE28 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gm5416Q6IE28 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Gm5416Q6IE28 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gm5416Q6IE28 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gm5416Q6IE28 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm5416Q6IE28 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm5416Q6IE28 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm5416Q6IE28 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Gm5416Q6IE28 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.26■□□□□ 0.67
Gm5416Q6IE28 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.26■□□□□ 0.67
Gm5416Q6IE28 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
Gm5416Q6IE28 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.26■□□□□ 0.67
Gm5416Q6IE28 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm5416Q6IE28 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm5416Q6IE28 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm5416Q6IE28 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm5416Q6IE28 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm5416Q6IE28 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Gm5416Q6IE28 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Gm5416Q6IE28 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm5416Q6IE28 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Gm5416Q6IE28 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm5416Q6IE28 Gm45444-201ENSMUST00000211394 898 ntBASIC19.25■□□□□ 0.67
Gm5416Q6IE28 Gm5921-201ENSMUST00000075898 882 ntBASIC19.25■□□□□ 0.67
Gm5416Q6IE28 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm5416Q6IE28 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Gm5416Q6IE28 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm5416Q6IE28 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Gm5416Q6IE28 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gm5416Q6IE28 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gm5416Q6IE28 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.24■□□□□ 0.67
Gm5416Q6IE28 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.24■□□□□ 0.67
Gm5416Q6IE28 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gm5416Q6IE28 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gm5416Q6IE28 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gm5416Q6IE28 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm5416Q6IE28 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Gm5416Q6IE28 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Gm5416Q6IE28 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm5416Q6IE28 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms