Protein–RNA interactions for Protein: Q5R1I3

Trav7-2, T cell receptor alpha variable 7-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-2Q5R1I3 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav7-2Q5R1I3 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav7-2Q5R1I3 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav7-2Q5R1I3 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav7-2Q5R1I3 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav7-2Q5R1I3 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Trav7-2Q5R1I3 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav7-2Q5R1I3 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC15.33■□□□□ 0.04
Trav7-2Q5R1I3 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav7-2Q5R1I3 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Trav7-2Q5R1I3 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav7-2Q5R1I3 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav7-2Q5R1I3 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav7-2Q5R1I3 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Trav7-2Q5R1I3 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav7-2Q5R1I3 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC15.32■□□□□ 0.04
Trav7-2Q5R1I3 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC15.32■□□□□ 0.04
Trav7-2Q5R1I3 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Trav7-2Q5R1I3 Nsd1-206ENSMUST00000224918 1001 ntBASIC15.32■□□□□ 0.04
Trav7-2Q5R1I3 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav7-2Q5R1I3 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav7-2Q5R1I3 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Trav7-2Q5R1I3 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav7-2Q5R1I3 Gm12504-201ENSMUST00000120860 2231 ntBASIC15.31■□□□□ 0.04
Trav7-2Q5R1I3 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Trav7-2Q5R1I3 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav7-2Q5R1I3 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav7-2Q5R1I3 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav7-2Q5R1I3 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav7-2Q5R1I3 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC15.31■□□□□ 0.04
Trav7-2Q5R1I3 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav7-2Q5R1I3 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Trav7-2Q5R1I3 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav7-2Q5R1I3 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav7-2Q5R1I3 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav7-2Q5R1I3 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav7-2Q5R1I3 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav7-2Q5R1I3 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
Trav7-2Q5R1I3 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav7-2Q5R1I3 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav7-2Q5R1I3 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav7-2Q5R1I3 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav7-2Q5R1I3 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav7-2Q5R1I3 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Trav7-2Q5R1I3 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav7-2Q5R1I3 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav7-2Q5R1I3 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav7-2Q5R1I3 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav7-2Q5R1I3 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav7-2Q5R1I3 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav7-2Q5R1I3 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav7-2Q5R1I3 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav7-2Q5R1I3 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav7-2Q5R1I3 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav7-2Q5R1I3 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
Trav7-2Q5R1I3 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav7-2Q5R1I3 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav7-2Q5R1I3 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav7-2Q5R1I3 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Trav7-2Q5R1I3 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC15.29■□□□□ 0.04
Trav7-2Q5R1I3 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav7-2Q5R1I3 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav7-2Q5R1I3 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Trav7-2Q5R1I3 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav7-2Q5R1I3 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav7-2Q5R1I3 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Trav7-2Q5R1I3 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav7-2Q5R1I3 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav7-2Q5R1I3 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav7-2Q5R1I3 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Trav7-2Q5R1I3 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC15.28■□□□□ 0.04
Trav7-2Q5R1I3 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav7-2Q5R1I3 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC15.28■□□□□ 0.04
Trav7-2Q5R1I3 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav7-2Q5R1I3 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trav7-2Q5R1I3 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trav7-2Q5R1I3 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav7-2Q5R1I3 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC15.27■□□□□ 0.04
Trav7-2Q5R1I3 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC15.27■□□□□ 0.04
Trav7-2Q5R1I3 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav7-2Q5R1I3 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Trav7-2Q5R1I3 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav7-2Q5R1I3 AC115037.1-201ENSMUST00000223391 2173 ntBASIC15.27■□□□□ 0.04
Trav7-2Q5R1I3 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav7-2Q5R1I3 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC15.27■□□□□ 0.04
Trav7-2Q5R1I3 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trav7-2Q5R1I3 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Trav7-2Q5R1I3 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC15.27■□□□□ 0.04
Trav7-2Q5R1I3 Gm45444-201ENSMUST00000211394 898 ntBASIC15.27■□□□□ 0.04
Trav7-2Q5R1I3 Nsd1-203ENSMUST00000224156 1149 ntBASIC15.27■□□□□ 0.04
Trav7-2Q5R1I3 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav7-2Q5R1I3 Gm5921-201ENSMUST00000075898 882 ntBASIC15.27■□□□□ 0.04
Trav7-2Q5R1I3 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav7-2Q5R1I3 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav7-2Q5R1I3 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav7-2Q5R1I3 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Trav7-2Q5R1I3 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav7-2Q5R1I3 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav7-2Q5R1I3 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav7-2Q5R1I3 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms