Protein–RNA interactions for Protein: Q3UMB5

Smcr8, Guanine nucleotide exchange protein SMCR8, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smcr8Q3UMB5 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
Smcr8Q3UMB5 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
Smcr8Q3UMB5 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC22.34■■□□□ 1.17
Smcr8Q3UMB5 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC22.34■■□□□ 1.17
Smcr8Q3UMB5 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Smcr8Q3UMB5 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Smcr8Q3UMB5 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Smcr8Q3UMB5 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Smcr8Q3UMB5 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC22.34■■□□□ 1.17
Smcr8Q3UMB5 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Smcr8Q3UMB5 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Smcr8Q3UMB5 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Smcr8Q3UMB5 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Smcr8Q3UMB5 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
Smcr8Q3UMB5 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC22.33■■□□□ 1.16
Smcr8Q3UMB5 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Smcr8Q3UMB5 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Smcr8Q3UMB5 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC22.32■■□□□ 1.16
Smcr8Q3UMB5 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Smcr8Q3UMB5 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Smcr8Q3UMB5 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC22.32■■□□□ 1.16
Smcr8Q3UMB5 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC22.32■■□□□ 1.16
Smcr8Q3UMB5 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC22.32■■□□□ 1.16
Smcr8Q3UMB5 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC22.32■■□□□ 1.16
Smcr8Q3UMB5 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC22.32■■□□□ 1.16
Smcr8Q3UMB5 Golgb1-201ENSMUST00000023534 498 ntBASIC22.32■■□□□ 1.16
Smcr8Q3UMB5 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Smcr8Q3UMB5 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Smcr8Q3UMB5 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Smcr8Q3UMB5 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
Smcr8Q3UMB5 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
Smcr8Q3UMB5 Gm13042-201ENSMUST00000119244 1955 ntBASIC22.31■■□□□ 1.16
Smcr8Q3UMB5 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
Smcr8Q3UMB5 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC22.31■■□□□ 1.16
Smcr8Q3UMB5 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Smcr8Q3UMB5 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC22.31■■□□□ 1.16
Smcr8Q3UMB5 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC22.31■■□□□ 1.16
Smcr8Q3UMB5 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Smcr8Q3UMB5 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Smcr8Q3UMB5 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Smcr8Q3UMB5 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC22.3■■□□□ 1.16
Smcr8Q3UMB5 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC22.3■■□□□ 1.16
Smcr8Q3UMB5 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
Smcr8Q3UMB5 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Smcr8Q3UMB5 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Smcr8Q3UMB5 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC22.3■■□□□ 1.16
Smcr8Q3UMB5 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Smcr8Q3UMB5 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
Smcr8Q3UMB5 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
Smcr8Q3UMB5 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Smcr8Q3UMB5 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Smcr8Q3UMB5 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC22.29■■□□□ 1.16
Smcr8Q3UMB5 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Smcr8Q3UMB5 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Smcr8Q3UMB5 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
Smcr8Q3UMB5 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Smcr8Q3UMB5 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Smcr8Q3UMB5 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Smcr8Q3UMB5 Appbp2os-202ENSMUST00000206972 447 ntBASIC22.28■■□□□ 1.16
Smcr8Q3UMB5 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Smcr8Q3UMB5 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Smcr8Q3UMB5 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
Smcr8Q3UMB5 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Smcr8Q3UMB5 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Smcr8Q3UMB5 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Smcr8Q3UMB5 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Smcr8Q3UMB5 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Smcr8Q3UMB5 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC22.26■■□□□ 1.15
Smcr8Q3UMB5 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Smcr8Q3UMB5 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC22.26■■□□□ 1.15
Smcr8Q3UMB5 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
Smcr8Q3UMB5 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC22.26■■□□□ 1.15
Smcr8Q3UMB5 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Smcr8Q3UMB5 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Smcr8Q3UMB5 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Smcr8Q3UMB5 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Smcr8Q3UMB5 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Smcr8Q3UMB5 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
Smcr8Q3UMB5 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Smcr8Q3UMB5 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
Smcr8Q3UMB5 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Smcr8Q3UMB5 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC22.23■■□□□ 1.15
Smcr8Q3UMB5 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Smcr8Q3UMB5 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Smcr8Q3UMB5 Gm12821-201ENSMUST00000120022 600 ntBASIC22.23■■□□□ 1.15
Smcr8Q3UMB5 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Smcr8Q3UMB5 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC22.23■■□□□ 1.15
Smcr8Q3UMB5 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
Smcr8Q3UMB5 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Smcr8Q3UMB5 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC22.22■■□□□ 1.15
Smcr8Q3UMB5 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Smcr8Q3UMB5 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Smcr8Q3UMB5 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Smcr8Q3UMB5 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
Smcr8Q3UMB5 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Smcr8Q3UMB5 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Smcr8Q3UMB5 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Smcr8Q3UMB5 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Smcr8Q3UMB5 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
Smcr8Q3UMB5 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms