Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Xcl1P47993 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Xcl1P47993 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Xcl1P47993 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
Xcl1P47993 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Xcl1P47993 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Xcl1P47993 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Xcl1P47993 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Xcl1P47993 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Xcl1P47993 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Xcl1P47993 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Xcl1P47993 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Xcl1P47993 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Xcl1P47993 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Xcl1P47993 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Xcl1P47993 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Xcl1P47993 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Xcl1P47993 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Xcl1P47993 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Xcl1P47993 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Xcl1P47993 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Xcl1P47993 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Xcl1P47993 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Xcl1P47993 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Xcl1P47993 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Xcl1P47993 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Xcl1P47993 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Xcl1P47993 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Xcl1P47993 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Xcl1P47993 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Xcl1P47993 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Xcl1P47993 Gm28731-201ENSMUST00000185564 1569 ntBASIC13.62□□□□□ -0.23
Xcl1P47993 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Xcl1P47993 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Xcl1P47993 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Xcl1P47993 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Xcl1P47993 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Xcl1P47993 Gm14121-201ENSMUST00000121441 1380 ntBASIC13.61□□□□□ -0.23
Xcl1P47993 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Xcl1P47993 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Xcl1P47993 Gm42418-201ENSMUST00000182010 1831 ntBASIC13.61□□□□□ -0.23
Xcl1P47993 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Xcl1P47993 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Xcl1P47993 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Xcl1P47993 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Xcl1P47993 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC13.6□□□□□ -0.23
Xcl1P47993 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Xcl1P47993 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Xcl1P47993 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Xcl1P47993 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Xcl1P47993 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC13.6□□□□□ -0.23
Xcl1P47993 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Xcl1P47993 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Xcl1P47993 Gm22567-201ENSMUST00000175542 342 ntBASIC13.59□□□□□ -0.23
Xcl1P47993 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Xcl1P47993 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Xcl1P47993 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Xcl1P47993 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Xcl1P47993 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Xcl1P47993 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Xcl1P47993 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Xcl1P47993 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Xcl1P47993 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
Xcl1P47993 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Xcl1P47993 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Xcl1P47993 Gm43182-201ENSMUST00000199476 2528 ntBASIC13.58□□□□□ -0.23
Xcl1P47993 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Xcl1P47993 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Xcl1P47993 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Xcl1P47993 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Xcl1P47993 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Xcl1P47993 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Xcl1P47993 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Xcl1P47993 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Xcl1P47993 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
Xcl1P47993 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Xcl1P47993 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Xcl1P47993 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Xcl1P47993 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC13.57□□□□□ -0.24
Xcl1P47993 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Xcl1P47993 Gm9954-202ENSMUST00000198686 4725 ntBASIC13.57□□□□□ -0.24
Xcl1P47993 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Xcl1P47993 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC13.57□□□□□ -0.24
Xcl1P47993 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Xcl1P47993 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Xcl1P47993 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Xcl1P47993 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Xcl1P47993 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Xcl1P47993 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Xcl1P47993 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Xcl1P47993 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Xcl1P47993 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Xcl1P47993 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Xcl1P47993 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Xcl1P47993 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
Xcl1P47993 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Xcl1P47993 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Xcl1P47993 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Xcl1P47993 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Xcl1P47993 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms