Protein–RNA interactions for Protein: O55242

Sigmar1, Sigma non-opioid intracellular receptor 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sigmar1O55242 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sigmar1O55242 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sigmar1O55242 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Sigmar1O55242 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sigmar1O55242 Grk6-206ENSMUST00000224995 2971 ntBASIC14.28□□□□□ -0.12
Sigmar1O55242 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
Sigmar1O55242 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sigmar1O55242 Gm9910-201ENSMUST00000195385 1550 ntBASIC14.27□□□□□ -0.12
Sigmar1O55242 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sigmar1O55242 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sigmar1O55242 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sigmar1O55242 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sigmar1O55242 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Sigmar1O55242 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sigmar1O55242 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Sigmar1O55242 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sigmar1O55242 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Sigmar1O55242 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sigmar1O55242 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Sigmar1O55242 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Sigmar1O55242 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC14.26□□□□□ -0.13
Sigmar1O55242 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sigmar1O55242 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sigmar1O55242 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sigmar1O55242 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Sigmar1O55242 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC14.26□□□□□ -0.13
Sigmar1O55242 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sigmar1O55242 Gm19439-201ENSMUST00000198195 2273 ntBASIC14.26□□□□□ -0.13
Sigmar1O55242 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sigmar1O55242 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Sigmar1O55242 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sigmar1O55242 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sigmar1O55242 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sigmar1O55242 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sigmar1O55242 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sigmar1O55242 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sigmar1O55242 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sigmar1O55242 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC14.25□□□□□ -0.13
Sigmar1O55242 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Sigmar1O55242 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sigmar1O55242 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sigmar1O55242 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC14.24□□□□□ -0.13
Sigmar1O55242 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sigmar1O55242 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Sigmar1O55242 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Sigmar1O55242 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sigmar1O55242 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sigmar1O55242 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC14.24□□□□□ -0.13
Sigmar1O55242 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sigmar1O55242 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sigmar1O55242 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Sigmar1O55242 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sigmar1O55242 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sigmar1O55242 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sigmar1O55242 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sigmar1O55242 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sigmar1O55242 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sigmar1O55242 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Sigmar1O55242 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sigmar1O55242 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sigmar1O55242 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sigmar1O55242 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Sigmar1O55242 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sigmar1O55242 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sigmar1O55242 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC14.22□□□□□ -0.13
Sigmar1O55242 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sigmar1O55242 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sigmar1O55242 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Sigmar1O55242 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC14.22□□□□□ -0.13
Sigmar1O55242 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sigmar1O55242 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sigmar1O55242 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sigmar1O55242 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC14.22□□□□□ -0.13
Sigmar1O55242 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sigmar1O55242 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sigmar1O55242 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Sigmar1O55242 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sigmar1O55242 Gm43548-201ENSMUST00000197139 2353 ntBASIC14.22□□□□□ -0.13
Sigmar1O55242 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sigmar1O55242 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sigmar1O55242 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Sigmar1O55242 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sigmar1O55242 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Sigmar1O55242 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Sigmar1O55242 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Sigmar1O55242 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Sigmar1O55242 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sigmar1O55242 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC14.21□□□□□ -0.13
Sigmar1O55242 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Sigmar1O55242 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Sigmar1O55242 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sigmar1O55242 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC14.21□□□□□ -0.14
Sigmar1O55242 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Sigmar1O55242 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Sigmar1O55242 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sigmar1O55242 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sigmar1O55242 Gm37194-201ENSMUST00000193092 3031 ntBASIC14.2□□□□□ -0.14
Sigmar1O55242 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sigmar1O55242 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC14.2□□□□□ -0.14
Sigmar1O55242 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms