Protein–RNA interactions for Protein: O35874

Slc1a4, Neutral amino acid transporter A, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a4O35874 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Slc1a4O35874 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC24.45■■□□□ 1.5
Slc1a4O35874 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Slc1a4O35874 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Slc1a4O35874 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Slc1a4O35874 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Slc1a4O35874 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC24.45■■□□□ 1.5
Slc1a4O35874 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.5
Slc1a4O35874 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
Slc1a4O35874 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
Slc1a4O35874 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
Slc1a4O35874 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC24.44■■□□□ 1.5
Slc1a4O35874 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Slc1a4O35874 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
Slc1a4O35874 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Slc1a4O35874 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Slc1a4O35874 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Slc1a4O35874 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Slc1a4O35874 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Slc1a4O35874 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Slc1a4O35874 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Slc1a4O35874 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC24.43■■□□□ 1.5
Slc1a4O35874 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Slc1a4O35874 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Slc1a4O35874 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Slc1a4O35874 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Slc1a4O35874 Gm13042-201ENSMUST00000119244 1955 ntBASIC24.42■■□□□ 1.5
Slc1a4O35874 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Slc1a4O35874 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Slc1a4O35874 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Slc1a4O35874 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC24.41■■□□□ 1.5
Slc1a4O35874 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
Slc1a4O35874 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
Slc1a4O35874 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Slc1a4O35874 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Slc1a4O35874 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC24.4■■□□□ 1.5
Slc1a4O35874 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC24.4■■□□□ 1.5
Slc1a4O35874 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Slc1a4O35874 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Slc1a4O35874 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Slc1a4O35874 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Slc1a4O35874 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Slc1a4O35874 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Slc1a4O35874 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
Slc1a4O35874 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Slc1a4O35874 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC24.39■■□□□ 1.49
Slc1a4O35874 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Slc1a4O35874 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Slc1a4O35874 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
Slc1a4O35874 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC24.38■■□□□ 1.49
Slc1a4O35874 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Slc1a4O35874 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Slc1a4O35874 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Slc1a4O35874 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Slc1a4O35874 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Slc1a4O35874 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Slc1a4O35874 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Slc1a4O35874 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Slc1a4O35874 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Slc1a4O35874 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Slc1a4O35874 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Slc1a4O35874 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Slc1a4O35874 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC24.37■■□□□ 1.49
Slc1a4O35874 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Slc1a4O35874 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC24.37■■□□□ 1.49
Slc1a4O35874 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Slc1a4O35874 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
Slc1a4O35874 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
Slc1a4O35874 Gm37415-201ENSMUST00000192265 2054 ntBASIC24.36■■□□□ 1.49
Slc1a4O35874 Gm4430-201ENSMUST00000192413 1943 ntBASIC24.36■■□□□ 1.49
Slc1a4O35874 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC24.36■■□□□ 1.49
Slc1a4O35874 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
Slc1a4O35874 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Slc1a4O35874 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC24.35■■□□□ 1.49
Slc1a4O35874 AC164883.3-201ENSMUST00000227396 1774 ntBASIC24.35■■□□□ 1.49
Slc1a4O35874 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
Slc1a4O35874 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Slc1a4O35874 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Slc1a4O35874 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Slc1a4O35874 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Slc1a4O35874 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Slc1a4O35874 Kdm3b-204ENSMUST00000224715 2032 ntBASIC24.34■■□□□ 1.49
Slc1a4O35874 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Slc1a4O35874 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Slc1a4O35874 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC24.34■■□□□ 1.49
Slc1a4O35874 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC24.34■■□□□ 1.49
Slc1a4O35874 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Slc1a4O35874 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC24.34■■□□□ 1.49
Slc1a4O35874 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Slc1a4O35874 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Slc1a4O35874 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Slc1a4O35874 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
Slc1a4O35874 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
Slc1a4O35874 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Slc1a4O35874 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC24.32■■□□□ 1.48
Slc1a4O35874 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Slc1a4O35874 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC24.32■■□□□ 1.48
Slc1a4O35874 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC24.32■■□□□ 1.48
Slc1a4O35874 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
Slc1a4O35874 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms