Protein–RNA interactions for Protein: Q9WUH2

Lhx9, LIM/homeobox protein Lhx9, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx9Q9WUH2 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Lhx9Q9WUH2 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Lhx9Q9WUH2 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC11.64□□□□□ -0.55
Lhx9Q9WUH2 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lhx9Q9WUH2 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Lhx9Q9WUH2 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lhx9Q9WUH2 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Lhx9Q9WUH2 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Lhx9Q9WUH2 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Lhx9Q9WUH2 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Lhx9Q9WUH2 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Lhx9Q9WUH2 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Lhx9Q9WUH2 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Lhx9Q9WUH2 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Lhx9Q9WUH2 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Lhx9Q9WUH2 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Lhx9Q9WUH2 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Lhx9Q9WUH2 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Lhx9Q9WUH2 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Lhx9Q9WUH2 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Lhx9Q9WUH2 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Lhx9Q9WUH2 Gm24934-201ENSMUST00000103764 111 ntBASIC11.63□□□□□ -0.55
Lhx9Q9WUH2 Gm14644-201ENSMUST00000116671 647 ntBASIC11.63□□□□□ -0.55
Lhx9Q9WUH2 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Lhx9Q9WUH2 Gm16481-201ENSMUST00000119074 1227 ntBASIC11.63□□□□□ -0.55
Lhx9Q9WUH2 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC11.63□□□□□ -0.55
Lhx9Q9WUH2 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Lhx9Q9WUH2 Gm42997-202ENSMUST00000200321 985 ntBASIC11.63□□□□□ -0.55
Lhx9Q9WUH2 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC11.63□□□□□ -0.55
Lhx9Q9WUH2 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC11.63□□□□□ -0.55
Lhx9Q9WUH2 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC11.63□□□□□ -0.55
Lhx9Q9WUH2 Gm18730-201ENSMUST00000218038 343 ntBASIC11.63□□□□□ -0.55
Lhx9Q9WUH2 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Lhx9Q9WUH2 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC11.63□□□□□ -0.55
Lhx9Q9WUH2 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Lhx9Q9WUH2 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Lhx9Q9WUH2 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Lhx9Q9WUH2 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Lhx9Q9WUH2 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC11.63□□□□□ -0.55
Lhx9Q9WUH2 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Lhx9Q9WUH2 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Lhx9Q9WUH2 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC11.63□□□□□ -0.55
Lhx9Q9WUH2 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC11.63□□□□□ -0.55
Lhx9Q9WUH2 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Lhx9Q9WUH2 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Lhx9Q9WUH2 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Lhx9Q9WUH2 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Lhx9Q9WUH2 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Lhx9Q9WUH2 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Lhx9Q9WUH2 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Lhx9Q9WUH2 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lhx9Q9WUH2 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Lhx9Q9WUH2 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Lhx9Q9WUH2 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lhx9Q9WUH2 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Lhx9Q9WUH2 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Lhx9Q9WUH2 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lhx9Q9WUH2 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Lhx9Q9WUH2 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lhx9Q9WUH2 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.62□□□□□ -0.55
Lhx9Q9WUH2 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Lhx9Q9WUH2 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lhx9Q9WUH2 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lhx9Q9WUH2 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Lhx9Q9WUH2 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lhx9Q9WUH2 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Lhx9Q9WUH2 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC11.62□□□□□ -0.55
Lhx9Q9WUH2 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
Lhx9Q9WUH2 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lhx9Q9WUH2 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Lhx9Q9WUH2 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Lhx9Q9WUH2 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC11.62□□□□□ -0.55
Lhx9Q9WUH2 Gm4034-201ENSMUST00000187674 480 ntBASIC11.62□□□□□ -0.55
Lhx9Q9WUH2 Gm7003-201ENSMUST00000195089 312 ntBASIC11.62□□□□□ -0.55
Lhx9Q9WUH2 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.62□□□□□ -0.55
Lhx9Q9WUH2 Gm43378-201ENSMUST00000199336 582 ntBASIC11.62□□□□□ -0.55
Lhx9Q9WUH2 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC11.62□□□□□ -0.55
Lhx9Q9WUH2 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lhx9Q9WUH2 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lhx9Q9WUH2 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lhx9Q9WUH2 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Lhx9Q9WUH2 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Lhx9Q9WUH2 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Lhx9Q9WUH2 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Lhx9Q9WUH2 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lhx9Q9WUH2 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Lhx9Q9WUH2 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lhx9Q9WUH2 Mbnl2-204ENSMUST00000227012 2390 ntBASIC11.62□□□□□ -0.55
Lhx9Q9WUH2 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lhx9Q9WUH2 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lhx9Q9WUH2 Gm44241-201ENSMUST00000203230 1662 ntBASIC11.62□□□□□ -0.55
Lhx9Q9WUH2 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Lhx9Q9WUH2 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lhx9Q9WUH2 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Lhx9Q9WUH2 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Lhx9Q9WUH2 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Lhx9Q9WUH2 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lhx9Q9WUH2 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lhx9Q9WUH2 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lhx9Q9WUH2 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 161.1 ms