Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCM2LQ9NUG4 KRT8P37-201ENST00000451609 1420 ntBASIC14.67□□□□□ -0.06
CCM2LQ9NUG4 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
CCM2LQ9NUG4 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.67□□□□□ -0.06
CCM2LQ9NUG4 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCM2LQ9NUG4 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
CCM2LQ9NUG4 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.67□□□□□ -0.06
CCM2LQ9NUG4 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCM2LQ9NUG4 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.67□□□□□ -0.06
CCM2LQ9NUG4 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCM2LQ9NUG4 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
CCM2LQ9NUG4 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CCM2LQ9NUG4 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCM2LQ9NUG4 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CCM2LQ9NUG4 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCM2LQ9NUG4 FALEC-201ENST00000416894 566 ntTSL 3 BASIC14.67□□□□□ -0.06
CCM2LQ9NUG4 AL671277.1-201ENST00000429656 993 ntBASIC14.67□□□□□ -0.06
CCM2LQ9NUG4 ADH5P3-201ENST00000433842 1137 ntBASIC14.67□□□□□ -0.06
CCM2LQ9NUG4 SPDYE11-202ENST00000450699 704 ntBASIC14.67□□□□□ -0.06
CCM2LQ9NUG4 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CCM2LQ9NUG4 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCM2LQ9NUG4 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.67□□□□□ -0.06
CCM2LQ9NUG4 SPDYE9P-201ENST00000570642 692 ntBASIC14.67□□□□□ -0.06
CCM2LQ9NUG4 CECR7-204ENST00000609932 568 ntTSL 2 BASIC14.67□□□□□ -0.06
CCM2LQ9NUG4 SPDYE10P-202ENST00000612005 668 ntBASIC14.67□□□□□ -0.06
CCM2LQ9NUG4 SPDYE8P-202ENST00000612377 668 ntBASIC14.67□□□□□ -0.06
CCM2LQ9NUG4 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CCM2LQ9NUG4 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
CCM2LQ9NUG4 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCM2LQ9NUG4 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CCM2LQ9NUG4 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.67□□□□□ -0.06
CCM2LQ9NUG4 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC14.67□□□□□ -0.06
CCM2LQ9NUG4 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCM2LQ9NUG4 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCM2LQ9NUG4 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCM2LQ9NUG4 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCM2LQ9NUG4 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCM2LQ9NUG4 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCM2LQ9NUG4 TUBB3P1-201ENST00000405796 1332 ntBASIC14.66□□□□□ -0.06
CCM2LQ9NUG4 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CCM2LQ9NUG4 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
CCM2LQ9NUG4 AL136982.4-201ENST00000437689 1740 ntBASIC14.66□□□□□ -0.06
CCM2LQ9NUG4 MBLAC2-202ENST00000514906 1936 ntBASIC14.66□□□□□ -0.06
CCM2LQ9NUG4 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCM2LQ9NUG4 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCM2LQ9NUG4 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CCM2LQ9NUG4 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CCM2LQ9NUG4 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CCM2LQ9NUG4 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCM2LQ9NUG4 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
CCM2LQ9NUG4 AP001267.2-201ENST00000532619 2086 ntBASIC14.66□□□□□ -0.06
CCM2LQ9NUG4 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CCM2LQ9NUG4 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCM2LQ9NUG4 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.66□□□□□ -0.06
CCM2LQ9NUG4 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCM2LQ9NUG4 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCM2LQ9NUG4 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCM2LQ9NUG4 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCM2LQ9NUG4 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCM2LQ9NUG4 MIR661-201ENST00000384842 89 ntBASIC14.66□□□□□ -0.06
CCM2LQ9NUG4 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC14.66□□□□□ -0.06
CCM2LQ9NUG4 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.66□□□□□ -0.06
CCM2LQ9NUG4 AL592309.1-201ENST00000443127 649 ntBASIC14.66□□□□□ -0.06
CCM2LQ9NUG4 EEF1DP4-201ENST00000446006 880 ntBASIC14.66□□□□□ -0.06
CCM2LQ9NUG4 UGT1A2P-201ENST00000454886 866 ntBASIC14.66□□□□□ -0.06
CCM2LQ9NUG4 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.66□□□□□ -0.06
CCM2LQ9NUG4 KRT8P48-201ENST00000515599 1220 ntBASIC14.66□□□□□ -0.06
CCM2LQ9NUG4 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC14.66□□□□□ -0.06
CCM2LQ9NUG4 FAM86C2P-203ENST00000528684 1004 ntBASIC14.66□□□□□ -0.06
CCM2LQ9NUG4 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
CCM2LQ9NUG4 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC14.66□□□□□ -0.06
CCM2LQ9NUG4 AC051619.7-201ENST00000568314 623 ntBASIC14.66□□□□□ -0.06
CCM2LQ9NUG4 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
CCM2LQ9NUG4 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC14.66□□□□□ -0.06
CCM2LQ9NUG4 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CCM2LQ9NUG4 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCM2LQ9NUG4 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCM2LQ9NUG4 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCM2LQ9NUG4 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCM2LQ9NUG4 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCM2LQ9NUG4 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CCM2LQ9NUG4 AC015656.1-201ENST00000624209 3578 ntBASIC14.66□□□□□ -0.06
CCM2LQ9NUG4 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CCM2LQ9NUG4 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CCM2LQ9NUG4 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.66□□□□□ -0.06
CCM2LQ9NUG4 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CCM2LQ9NUG4 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CCM2LQ9NUG4 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCM2LQ9NUG4 BSG-215ENST00000618006 1329 ntTSL 2 BASIC14.66□□□□□ -0.06
CCM2LQ9NUG4 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCM2LQ9NUG4 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCM2LQ9NUG4 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CCM2LQ9NUG4 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CCM2LQ9NUG4 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
CCM2LQ9NUG4 AC018529.2-202ENST00000611482 3087 ntBASIC14.65□□□□□ -0.06
CCM2LQ9NUG4 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.65□□□□□ -0.06
CCM2LQ9NUG4 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCM2LQ9NUG4 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
CCM2LQ9NUG4 AC084364.1-201ENST00000551967 1556 ntBASIC14.65□□□□□ -0.06
CCM2LQ9NUG4 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms