Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC10.93□□□□□ -0.66
P06344 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC10.93□□□□□ -0.66
P06344 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
P06344 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC10.93□□□□□ -0.66
P06344 Rprl1-202ENSMUST00000198476 238 ntBASIC10.93□□□□□ -0.66
P06344 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC10.93□□□□□ -0.66
P06344 Gm19187-201ENSMUST00000206781 892 ntBASIC10.93□□□□□ -0.66
P06344 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
P06344 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC10.93□□□□□ -0.66
P06344 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC10.93□□□□□ -0.66
P06344 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC10.93□□□□□ -0.66
P06344 CT030182.1-201ENSMUST00000225935 533 ntBASIC10.93□□□□□ -0.66
P06344 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
P06344 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
P06344 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
P06344 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
P06344 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
P06344 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
P06344 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
P06344 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
P06344 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
P06344 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
P06344 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
P06344 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
P06344 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
P06344 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
P06344 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
P06344 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
P06344 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC10.93□□□□□ -0.66
P06344 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
P06344 Gm18626-201ENSMUST00000221512 1409 ntBASIC10.92□□□□□ -0.66
P06344 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
P06344 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
P06344 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
P06344 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
P06344 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
P06344 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
P06344 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
P06344 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
P06344 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
P06344 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
P06344 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
P06344 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
P06344 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC10.92□□□□□ -0.66
P06344 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
P06344 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
P06344 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
P06344 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC10.92□□□□□ -0.66
P06344 Gm5070-201ENSMUST00000177599 862 ntBASIC10.92□□□□□ -0.66
P06344 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
P06344 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
P06344 Gm45224-201ENSMUST00000208203 414 ntBASIC10.92□□□□□ -0.66
P06344 Gm45598-202ENSMUST00000210719 986 ntBASIC10.92□□□□□ -0.66
P06344 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
P06344 CT025678.1-201ENSMUST00000214795 2972 ntBASIC10.92□□□□□ -0.66
P06344 AC159747.1-201ENSMUST00000219903 265 ntBASIC10.92□□□□□ -0.66
P06344 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
P06344 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
P06344 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
P06344 Gm43051-201ENSMUST00000201096 2678 ntBASIC10.92□□□□□ -0.66
P06344 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
P06344 Paupar-201ENSMUST00000194826 3482 ntBASIC10.92□□□□□ -0.66
P06344 Gm7224-201ENSMUST00000121359 2066 ntBASIC10.92□□□□□ -0.66
P06344 Gm43727-201ENSMUST00000198021 2647 ntBASIC10.92□□□□□ -0.66
P06344 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC10.92□□□□□ -0.66
P06344 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
P06344 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
P06344 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC10.92□□□□□ -0.66
P06344 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
P06344 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
P06344 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
P06344 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
P06344 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
P06344 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
P06344 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
P06344 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
P06344 Gm45495-201ENSMUST00000200940 1700 ntBASIC10.92□□□□□ -0.66
P06344 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
P06344 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
P06344 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
P06344 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
P06344 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC10.91□□□□□ -0.66
P06344 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
P06344 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC10.91□□□□□ -0.66
P06344 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
P06344 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
P06344 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
P06344 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
P06344 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC10.91□□□□□ -0.66
P06344 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
P06344 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
P06344 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
P06344 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
P06344 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
P06344 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC10.91□□□□□ -0.66
P06344 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
P06344 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
P06344 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
P06344 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
P06344 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms