Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Dlgap1-214ENSMUST00000155016 4712 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
P04224 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
P04224 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
P04224 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
P04224 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC10.75□□□□□ -0.69
P04224 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
P04224 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
P04224 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
P04224 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
P04224 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
P04224 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
P04224 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
P04224 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
P04224 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
P04224 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
P04224 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC10.75□□□□□ -0.69
P04224 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
P04224 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
P04224 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC10.75□□□□□ -0.69
P04224 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
P04224 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC10.75□□□□□ -0.69
P04224 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
P04224 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
P04224 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
P04224 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
P04224 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.75□□□□□ -0.69
P04224 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
P04224 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
P04224 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
P04224 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC10.75□□□□□ -0.69
P04224 Madd-205ENSMUST00000099723 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
P04224 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
P04224 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
P04224 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
P04224 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
P04224 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
P04224 Gm37542-201ENSMUST00000192563 2832 ntBASIC10.75□□□□□ -0.69
P04224 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
P04224 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
P04224 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
P04224 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
P04224 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
P04224 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
P04224 Gm3365-201ENSMUST00000216296 1480 ntBASIC10.74□□□□□ -0.69
P04224 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
P04224 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
P04224 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
P04224 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
P04224 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
P04224 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
P04224 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
P04224 Gm26660-202ENSMUST00000223620 4112 ntBASIC10.74□□□□□ -0.69
P04224 Kif4-201ENSMUST00000048962 4983 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
P04224 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
P04224 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
P04224 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
P04224 Gm14350-201ENSMUST00000116642 640 ntBASIC10.74□□□□□ -0.69
P04224 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
P04224 Ldha-ps-201ENSMUST00000119390 995 ntBASIC10.74□□□□□ -0.69
P04224 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
P04224 Gm16215-201ENSMUST00000161990 637 ntBASIC10.74□□□□□ -0.69
P04224 Gm9630-201ENSMUST00000178304 885 ntBASIC10.74□□□□□ -0.69
P04224 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC10.74□□□□□ -0.69
P04224 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC10.74□□□□□ -0.69
P04224 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC10.74□□□□□ -0.69
P04224 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC10.74□□□□□ -0.69
P04224 Gm18307-201ENSMUST00000206864 949 ntBASIC10.74□□□□□ -0.69
P04224 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC10.74□□□□□ -0.69
P04224 Gm6983-201ENSMUST00000214912 628 ntBASIC10.74□□□□□ -0.69
P04224 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC10.74□□□□□ -0.69
P04224 AC156560.2-201ENSMUST00000221232 264 ntBASIC10.74□□□□□ -0.69
P04224 Itm2b-204ENSMUST00000228637 783 ntBASIC10.74□□□□□ -0.69
P04224 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
P04224 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
P04224 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
P04224 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
P04224 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC10.74□□□□□ -0.69
P04224 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
P04224 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
P04224 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
P04224 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
P04224 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
P04224 Tom1l2-203ENSMUST00000093048 4864 ntTSL 5 BASIC10.74□□□□□ -0.69
P04224 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
P04224 Sez6l-205ENSMUST00000212480 5857 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
P04224 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
P04224 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
P04224 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
P04224 Pcdhga7-201ENSMUST00000192511 4730 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
P04224 Gm42427-201ENSMUST00000200473 5292 ntBASIC10.73□□□□□ -0.69
P04224 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
P04224 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC10.73□□□□□ -0.69
P04224 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC10.73□□□□□ -0.69
P04224 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
P04224 Madd-202ENSMUST00000066473 5974 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
P04224 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC10.73□□□□□ -0.69
P04224 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC10.73□□□□□ -0.69
P04224 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
P04224 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
P04224 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 77.4 ms