Protein–RNA interactions for Protein: Q9JJF3

Riox1, Ribosomal oxygenase 1, mousemouse

Predictions only

Length 603 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Riox1Q9JJF3 Gm27046-201ENSMUST00000182160 463 ntBASIC11.11□□□□□ -0.63
Riox1Q9JJF3 Gm27320-201ENSMUST00000184892 109 ntBASIC11.11□□□□□ -0.63
Riox1Q9JJF3 Gm38317-201ENSMUST00000195564 343 ntBASIC11.11□□□□□ -0.63
Riox1Q9JJF3 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Riox1Q9JJF3 AC154171.1-201ENSMUST00000224610 643 ntBASIC11.11□□□□□ -0.63
Riox1Q9JJF3 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Riox1Q9JJF3 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Riox1Q9JJF3 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Riox1Q9JJF3 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Riox1Q9JJF3 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Riox1Q9JJF3 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Riox1Q9JJF3 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.11□□□□□ -0.63
Riox1Q9JJF3 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Riox1Q9JJF3 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Riox1Q9JJF3 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC11.11□□□□□ -0.63
Riox1Q9JJF3 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
Riox1Q9JJF3 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Riox1Q9JJF3 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Riox1Q9JJF3 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC11.11□□□□□ -0.63
Riox1Q9JJF3 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Riox1Q9JJF3 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Riox1Q9JJF3 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Riox1Q9JJF3 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Riox1Q9JJF3 Kcnk16-202ENSMUST00000225596 2127 ntBASIC11.11□□□□□ -0.63
Riox1Q9JJF3 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Riox1Q9JJF3 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Riox1Q9JJF3 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Riox1Q9JJF3 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Riox1Q9JJF3 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Riox1Q9JJF3 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Riox1Q9JJF3 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Riox1Q9JJF3 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Riox1Q9JJF3 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC11.1□□□□□ -0.63
Riox1Q9JJF3 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Riox1Q9JJF3 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC11.1□□□□□ -0.63
Riox1Q9JJF3 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Riox1Q9JJF3 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC11.1□□□□□ -0.63
Riox1Q9JJF3 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Riox1Q9JJF3 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Riox1Q9JJF3 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC11.1□□□□□ -0.63
Riox1Q9JJF3 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Riox1Q9JJF3 Gm6963-201ENSMUST00000147879 379 ntBASIC11.1□□□□□ -0.63
Riox1Q9JJF3 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Riox1Q9JJF3 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Riox1Q9JJF3 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC11.1□□□□□ -0.63
Riox1Q9JJF3 Ighv1-62-201ENSMUST00000193406 350 ntBASIC11.1□□□□□ -0.63
Riox1Q9JJF3 Gm45691-201ENSMUST00000206905 1120 ntBASIC11.1□□□□□ -0.63
Riox1Q9JJF3 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC11.1□□□□□ -0.63
Riox1Q9JJF3 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC11.1□□□□□ -0.63
Riox1Q9JJF3 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Riox1Q9JJF3 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Riox1Q9JJF3 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Riox1Q9JJF3 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Riox1Q9JJF3 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Riox1Q9JJF3 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Riox1Q9JJF3 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Riox1Q9JJF3 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Riox1Q9JJF3 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC11.1□□□□□ -0.63
Riox1Q9JJF3 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Riox1Q9JJF3 AC126444.1-201ENSMUST00000225938 1768 ntBASIC11.1□□□□□ -0.63
Riox1Q9JJF3 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Riox1Q9JJF3 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Riox1Q9JJF3 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Riox1Q9JJF3 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Riox1Q9JJF3 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC11.09□□□□□ -0.63
Riox1Q9JJF3 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Riox1Q9JJF3 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC11.09□□□□□ -0.63
Riox1Q9JJF3 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Riox1Q9JJF3 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Riox1Q9JJF3 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Riox1Q9JJF3 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Riox1Q9JJF3 Gm44241-201ENSMUST00000203230 1662 ntBASIC11.09□□□□□ -0.63
Riox1Q9JJF3 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Riox1Q9JJF3 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Riox1Q9JJF3 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Riox1Q9JJF3 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Riox1Q9JJF3 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC11.09□□□□□ -0.63
Riox1Q9JJF3 Gm25668-201ENSMUST00000157700 129 ntBASIC11.09□□□□□ -0.63
Riox1Q9JJF3 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Riox1Q9JJF3 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC11.09□□□□□ -0.63
Riox1Q9JJF3 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Riox1Q9JJF3 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Riox1Q9JJF3 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC11.09□□□□□ -0.63
Riox1Q9JJF3 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC11.09□□□□□ -0.63
Riox1Q9JJF3 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC11.09□□□□□ -0.63
Riox1Q9JJF3 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC11.09□□□□□ -0.63
Riox1Q9JJF3 Dhrs4-202ENSMUST00000226168 828 ntBASIC11.09□□□□□ -0.63
Riox1Q9JJF3 AC161537.1-201ENSMUST00000226199 1015 ntBASIC11.09□□□□□ -0.63
Riox1Q9JJF3 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Riox1Q9JJF3 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Riox1Q9JJF3 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Riox1Q9JJF3 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Riox1Q9JJF3 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Riox1Q9JJF3 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Riox1Q9JJF3 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
Riox1Q9JJF3 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Riox1Q9JJF3 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Riox1Q9JJF3 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Riox1Q9JJF3 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
Riox1Q9JJF3 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms