Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdh17E9PXF0 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdh17E9PXF0 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdh17E9PXF0 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdh17E9PXF0 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdh17E9PXF0 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Pcdh17E9PXF0 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdh17E9PXF0 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdh17E9PXF0 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdh17E9PXF0 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdh17E9PXF0 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdh17E9PXF0 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdh17E9PXF0 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdh17E9PXF0 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdh17E9PXF0 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.57
Pcdh17E9PXF0 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC11.46□□□□□ -0.57
Pcdh17E9PXF0 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.46□□□□□ -0.57
Pcdh17E9PXF0 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdh17E9PXF0 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC11.46□□□□□ -0.57
Pcdh17E9PXF0 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.57
Pcdh17E9PXF0 B9d1os-201ENSMUST00000137010 674 ntBASIC11.46□□□□□ -0.57
Pcdh17E9PXF0 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC11.46□□□□□ -0.57
Pcdh17E9PXF0 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Pcdh17E9PXF0 Gm25732-201ENSMUST00000175168 60 ntBASIC11.46□□□□□ -0.57
Pcdh17E9PXF0 Mir6979-201ENSMUST00000183927 56 ntBASIC11.46□□□□□ -0.57
Pcdh17E9PXF0 Gm28450-201ENSMUST00000187349 638 ntBASIC11.46□□□□□ -0.57
Pcdh17E9PXF0 Gm45598-202ENSMUST00000210719 986 ntBASIC11.46□□□□□ -0.57
Pcdh17E9PXF0 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdh17E9PXF0 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Pcdh17E9PXF0 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdh17E9PXF0 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdh17E9PXF0 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pcdh17E9PXF0 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
Pcdh17E9PXF0 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pcdh17E9PXF0 Gm9544-201ENSMUST00000223349 2482 ntBASIC11.46□□□□□ -0.58
Pcdh17E9PXF0 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pcdh17E9PXF0 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pcdh17E9PXF0 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pcdh17E9PXF0 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pcdh17E9PXF0 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pcdh17E9PXF0 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pcdh17E9PXF0 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pcdh17E9PXF0 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pcdh17E9PXF0 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.46□□□□□ -0.58
Pcdh17E9PXF0 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh17E9PXF0 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh17E9PXF0 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh17E9PXF0 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh17E9PXF0 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh17E9PXF0 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh17E9PXF0 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Pcdh17E9PXF0 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.45□□□□□ -0.58
Pcdh17E9PXF0 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh17E9PXF0 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh17E9PXF0 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC11.45□□□□□ -0.58
Pcdh17E9PXF0 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh17E9PXF0 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh17E9PXF0 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh17E9PXF0 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh17E9PXF0 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh17E9PXF0 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Pcdh17E9PXF0 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh17E9PXF0 Gm43721-201ENSMUST00000199677 2313 ntBASIC11.45□□□□□ -0.58
Pcdh17E9PXF0 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC11.45□□□□□ -0.58
Pcdh17E9PXF0 Gm5638-201ENSMUST00000118618 1258 ntBASIC11.45□□□□□ -0.58
Pcdh17E9PXF0 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh17E9PXF0 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Pcdh17E9PXF0 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh17E9PXF0 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh17E9PXF0 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC11.45□□□□□ -0.58
Pcdh17E9PXF0 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh17E9PXF0 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC11.45□□□□□ -0.58
Pcdh17E9PXF0 Gm42937-201ENSMUST00000197360 752 ntBASIC11.45□□□□□ -0.58
Pcdh17E9PXF0 Gm45433-201ENSMUST00000209386 247 ntBASIC11.45□□□□□ -0.58
Pcdh17E9PXF0 Aprt-ps-201ENSMUST00000212311 505 ntBASIC11.45□□□□□ -0.58
Pcdh17E9PXF0 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC11.45□□□□□ -0.58
Pcdh17E9PXF0 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC11.45□□□□□ -0.58
Pcdh17E9PXF0 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh17E9PXF0 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh17E9PXF0 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh17E9PXF0 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh17E9PXF0 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh17E9PXF0 CT025624.1-201ENSMUST00000224007 2700 ntBASIC11.45□□□□□ -0.58
Pcdh17E9PXF0 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh17E9PXF0 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh17E9PXF0 Gm37472-201ENSMUST00000192342 4052 ntBASIC11.45□□□□□ -0.58
Pcdh17E9PXF0 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC11.45□□□□□ -0.58
Pcdh17E9PXF0 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh17E9PXF0 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh17E9PXF0 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh17E9PXF0 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh17E9PXF0 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh17E9PXF0 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh17E9PXF0 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Pcdh17E9PXF0 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh17E9PXF0 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh17E9PXF0 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh17E9PXF0 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh17E9PXF0 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh17E9PXF0 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms