Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SCN11AQ9UI33 AC136759.1-202ENST00000530858 2194 ntBASIC19.25■□□□□ 0.67
SCN11AQ9UI33 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SCN11AQ9UI33 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
SCN11AQ9UI33 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC19.25■□□□□ 0.67
SCN11AQ9UI33 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC19.25■□□□□ 0.67
SCN11AQ9UI33 SKA2-202ENST00000437036 625 ntTSL 2 BASIC19.25■□□□□ 0.67
SCN11AQ9UI33 Z97180.1-201ENST00000445173 988 ntBASIC19.25■□□□□ 0.67
SCN11AQ9UI33 MAGEA5-201ENST00000446757 942 ntBASIC19.25■□□□□ 0.67
SCN11AQ9UI33 RN7SL67P-201ENST00000492147 296 ntBASIC19.25■□□□□ 0.67
SCN11AQ9UI33 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC19.25■□□□□ 0.67
SCN11AQ9UI33 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC19.25■□□□□ 0.67
SCN11AQ9UI33 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SCN11AQ9UI33 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SCN11AQ9UI33 AC020922.3-201ENST00000595064 547 ntBASIC19.25■□□□□ 0.67
SCN11AQ9UI33 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SCN11AQ9UI33 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SCN11AQ9UI33 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SCN11AQ9UI33 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC19.25■□□□□ 0.67
SCN11AQ9UI33 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SCN11AQ9UI33 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC19.25■□□□□ 0.67
SCN11AQ9UI33 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SCN11AQ9UI33 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SCN11AQ9UI33 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SCN11AQ9UI33 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
SCN11AQ9UI33 AC007950.2-201ENST00000615045 2347 ntBASIC19.25■□□□□ 0.67
SCN11AQ9UI33 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SCN11AQ9UI33 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SCN11AQ9UI33 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC19.24■□□□□ 0.67
SCN11AQ9UI33 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SCN11AQ9UI33 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SCN11AQ9UI33 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SCN11AQ9UI33 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC19.24■□□□□ 0.67
SCN11AQ9UI33 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC19.24■□□□□ 0.67
SCN11AQ9UI33 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SCN11AQ9UI33 AC012441.2-201ENST00000444843 739 ntBASIC19.24■□□□□ 0.67
SCN11AQ9UI33 NDUFS6P1-201ENST00000485187 316 ntBASIC19.24■□□□□ 0.67
SCN11AQ9UI33 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC19.24■□□□□ 0.67
SCN11AQ9UI33 MIR3677-201ENST00000578964 60 ntBASIC19.24■□□□□ 0.67
SCN11AQ9UI33 AC133540.1-201ENST00000620845 1019 ntBASIC19.24■□□□□ 0.67
SCN11AQ9UI33 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SCN11AQ9UI33 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SCN11AQ9UI33 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SCN11AQ9UI33 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SCN11AQ9UI33 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
SCN11AQ9UI33 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SCN11AQ9UI33 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SCN11AQ9UI33 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC19.24■□□□□ 0.67
SCN11AQ9UI33 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
SCN11AQ9UI33 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC19.24■□□□□ 0.67
SCN11AQ9UI33 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SCN11AQ9UI33 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SCN11AQ9UI33 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC19.24■□□□□ 0.67
SCN11AQ9UI33 AC090857.1-201ENST00000527400 390 ntBASIC19.24■□□□□ 0.67
SCN11AQ9UI33 RTN3P1-201ENST00000536295 711 ntBASIC19.24■□□□□ 0.67
SCN11AQ9UI33 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SCN11AQ9UI33 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC19.24■□□□□ 0.67
SCN11AQ9UI33 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SCN11AQ9UI33 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SCN11AQ9UI33 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC19.24■□□□□ 0.67
SCN11AQ9UI33 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC19.24■□□□□ 0.67
SCN11AQ9UI33 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SCN11AQ9UI33 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SCN11AQ9UI33 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC19.23■□□□□ 0.67
SCN11AQ9UI33 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SCN11AQ9UI33 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
SCN11AQ9UI33 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SCN11AQ9UI33 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
SCN11AQ9UI33 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SCN11AQ9UI33 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SCN11AQ9UI33 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SCN11AQ9UI33 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SCN11AQ9UI33 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC19.23■□□□□ 0.67
SCN11AQ9UI33 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
SCN11AQ9UI33 KRT8P28-201ENST00000433288 1390 ntBASIC19.23■□□□□ 0.67
SCN11AQ9UI33 CAP2P1-201ENST00000557743 1390 ntBASIC19.23■□□□□ 0.67
SCN11AQ9UI33 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SCN11AQ9UI33 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SCN11AQ9UI33 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SCN11AQ9UI33 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SCN11AQ9UI33 RNA5SP359-201ENST00000364838 113 ntBASIC19.23■□□□□ 0.67
SCN11AQ9UI33 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SCN11AQ9UI33 AC006335.1-201ENST00000445200 547 ntBASIC19.23■□□□□ 0.67
SCN11AQ9UI33 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC19.23■□□□□ 0.67
SCN11AQ9UI33 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC19.23■□□□□ 0.67
SCN11AQ9UI33 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC19.23■□□□□ 0.67
SCN11AQ9UI33 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC19.23■□□□□ 0.67
SCN11AQ9UI33 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
SCN11AQ9UI33 AC242376.1-201ENST00000559033 726 ntBASIC19.23■□□□□ 0.67
SCN11AQ9UI33 CENPX-208ENST00000584347 799 ntTSL 2 BASIC19.23■□□□□ 0.67
SCN11AQ9UI33 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
SCN11AQ9UI33 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
SCN11AQ9UI33 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
SCN11AQ9UI33 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SCN11AQ9UI33 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
SCN11AQ9UI33 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SCN11AQ9UI33 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SCN11AQ9UI33 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC19.22■□□□□ 0.67
SCN11AQ9UI33 CELP-203ENST00000624767 2414 ntTSL 5 BASIC19.22■□□□□ 0.67
SCN11AQ9UI33 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms