Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
VTA1Q9NP79 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
VTA1Q9NP79 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VTA1Q9NP79 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VTA1Q9NP79 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.03■□□□□ 0.32
VTA1Q9NP79 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.03■□□□□ 0.32
VTA1Q9NP79 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
VTA1Q9NP79 AL118508.1-201ENST00000613502 2345 ntBASIC17.03■□□□□ 0.32
VTA1Q9NP79 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
VTA1Q9NP79 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
VTA1Q9NP79 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VTA1Q9NP79 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
VTA1Q9NP79 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
VTA1Q9NP79 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
VTA1Q9NP79 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
VTA1Q9NP79 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.03■□□□□ 0.32
VTA1Q9NP79 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
VTA1Q9NP79 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
VTA1Q9NP79 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VTA1Q9NP79 RN7SKP175-201ENST00000408472 289 ntBASIC17.03■□□□□ 0.32
VTA1Q9NP79 AL008707.1-201ENST00000422498 534 ntBASIC17.03■□□□□ 0.32
VTA1Q9NP79 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VTA1Q9NP79 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
VTA1Q9NP79 AC021723.1-201ENST00000486306 515 ntBASIC17.03■□□□□ 0.32
VTA1Q9NP79 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
VTA1Q9NP79 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
VTA1Q9NP79 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC17.03■□□□□ 0.32
VTA1Q9NP79 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC17.03■□□□□ 0.32
VTA1Q9NP79 AC022748.3-201ENST00000621828 275 ntBASIC17.03■□□□□ 0.32
VTA1Q9NP79 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
VTA1Q9NP79 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.03■□□□□ 0.32
VTA1Q9NP79 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VTA1Q9NP79 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VTA1Q9NP79 DKFZP434H168-201ENST00000567381 1905 ntBASIC17.03■□□□□ 0.32
VTA1Q9NP79 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC17.03■□□□□ 0.32
VTA1Q9NP79 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VTA1Q9NP79 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.03■□□□□ 0.32
VTA1Q9NP79 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
VTA1Q9NP79 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.03■□□□□ 0.32
VTA1Q9NP79 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC17.03■□□□□ 0.32
VTA1Q9NP79 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
VTA1Q9NP79 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.03■□□□□ 0.32
VTA1Q9NP79 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
VTA1Q9NP79 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
VTA1Q9NP79 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
VTA1Q9NP79 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
VTA1Q9NP79 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
VTA1Q9NP79 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
VTA1Q9NP79 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.02■□□□□ 0.32
VTA1Q9NP79 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
VTA1Q9NP79 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
VTA1Q9NP79 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC17.02■□□□□ 0.32
VTA1Q9NP79 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
VTA1Q9NP79 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
VTA1Q9NP79 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC17.02■□□□□ 0.32
VTA1Q9NP79 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
VTA1Q9NP79 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
VTA1Q9NP79 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
VTA1Q9NP79 MIR769-201ENST00000390225 118 ntBASIC17.02■□□□□ 0.32
VTA1Q9NP79 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC17.02■□□□□ 0.32
VTA1Q9NP79 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC17.02■□□□□ 0.32
VTA1Q9NP79 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC17.02■□□□□ 0.32
VTA1Q9NP79 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
VTA1Q9NP79 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC17.02■□□□□ 0.32
VTA1Q9NP79 CDC23-208ENST00000505120 455 ntTSL 3 BASIC17.02■□□□□ 0.32
VTA1Q9NP79 AC005740.2-201ENST00000511085 419 ntBASIC17.02■□□□□ 0.32
VTA1Q9NP79 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC17.02■□□□□ 0.32
VTA1Q9NP79 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC17.02■□□□□ 0.32
VTA1Q9NP79 MIR4683-201ENST00000579659 81 ntBASIC17.02■□□□□ 0.32
VTA1Q9NP79 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC17.02■□□□□ 0.32
VTA1Q9NP79 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
VTA1Q9NP79 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
VTA1Q9NP79 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
VTA1Q9NP79 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC17.02■□□□□ 0.31
VTA1Q9NP79 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
VTA1Q9NP79 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
VTA1Q9NP79 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
VTA1Q9NP79 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC17.02■□□□□ 0.31
VTA1Q9NP79 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
VTA1Q9NP79 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
VTA1Q9NP79 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
VTA1Q9NP79 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.02■□□□□ 0.31
VTA1Q9NP79 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC17.02■□□□□ 0.31
VTA1Q9NP79 REXO1L4P-201ENST00000605109 1937 ntBASIC17.02■□□□□ 0.31
VTA1Q9NP79 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC17.01■□□□□ 0.31
VTA1Q9NP79 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.01■□□□□ 0.31
VTA1Q9NP79 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
VTA1Q9NP79 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
VTA1Q9NP79 AC012508.2-201ENST00000567613 1472 ntBASIC17.01■□□□□ 0.31
VTA1Q9NP79 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
VTA1Q9NP79 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
VTA1Q9NP79 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VTA1Q9NP79 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
VTA1Q9NP79 CICP11-201ENST00000434745 2827 ntBASIC17.01■□□□□ 0.31
VTA1Q9NP79 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VTA1Q9NP79 SDCCAG3P2-201ENST00000326105 1023 ntBASIC17.01■□□□□ 0.31
VTA1Q9NP79 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC17.01■□□□□ 0.31
VTA1Q9NP79 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
VTA1Q9NP79 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC17.01■□□□□ 0.31
VTA1Q9NP79 CYP46A4P-201ENST00000414953 267 ntBASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms