Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC13□□□□□ -0.33
PCGF1Q9BSM1 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
PCGF1Q9BSM1 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PCGF1Q9BSM1 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PCGF1Q9BSM1 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
PCGF1Q9BSM1 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PCGF1Q9BSM1 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC13□□□□□ -0.33
PCGF1Q9BSM1 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PCGF1Q9BSM1 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
PCGF1Q9BSM1 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
PCGF1Q9BSM1 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PCGF1Q9BSM1 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC13□□□□□ -0.33
PCGF1Q9BSM1 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
PCGF1Q9BSM1 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC13□□□□□ -0.33
PCGF1Q9BSM1 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
PCGF1Q9BSM1 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PCGF1Q9BSM1 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
PCGF1Q9BSM1 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PCGF1Q9BSM1 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC12.99□□□□□ -0.33
PCGF1Q9BSM1 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PCGF1Q9BSM1 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
PCGF1Q9BSM1 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PCGF1Q9BSM1 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC12.99□□□□□ -0.33
PCGF1Q9BSM1 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC12.99□□□□□ -0.33
PCGF1Q9BSM1 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
PCGF1Q9BSM1 Z97205.2-201ENST00000564697 1639 ntBASIC12.99□□□□□ -0.33
PCGF1Q9BSM1 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
PCGF1Q9BSM1 AC018892.3-201ENST00000623986 2499 ntBASIC12.99□□□□□ -0.33
PCGF1Q9BSM1 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PCGF1Q9BSM1 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC12.99□□□□□ -0.33
PCGF1Q9BSM1 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PCGF1Q9BSM1 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
PCGF1Q9BSM1 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
PCGF1Q9BSM1 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
PCGF1Q9BSM1 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
PCGF1Q9BSM1 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PCGF1Q9BSM1 PTPA-220ENST00000436883 532 ntTSL 4 BASIC12.99□□□□□ -0.33
PCGF1Q9BSM1 TARDBPP1-201ENST00000442013 1203 ntBASIC12.99□□□□□ -0.33
PCGF1Q9BSM1 KRT17P7-201ENST00000451704 1104 ntBASIC12.99□□□□□ -0.33
PCGF1Q9BSM1 MDH2-205ENST00000461263 648 ntTSL 2 BASIC12.99□□□□□ -0.33
PCGF1Q9BSM1 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC12.99□□□□□ -0.33
PCGF1Q9BSM1 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
PCGF1Q9BSM1 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
PCGF1Q9BSM1 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC12.99□□□□□ -0.33
PCGF1Q9BSM1 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC12.99□□□□□ -0.33
PCGF1Q9BSM1 AL596325.1-201ENST00000563991 1082 ntBASIC12.99□□□□□ -0.33
PCGF1Q9BSM1 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC12.99□□□□□ -0.33
PCGF1Q9BSM1 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC12.99□□□□□ -0.33
PCGF1Q9BSM1 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC12.99□□□□□ -0.33
PCGF1Q9BSM1 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC12.99□□□□□ -0.33
PCGF1Q9BSM1 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC12.99□□□□□ -0.33
PCGF1Q9BSM1 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC12.99□□□□□ -0.33
PCGF1Q9BSM1 CHCHD2P3-201ENST00000603038 451 ntBASIC12.99□□□□□ -0.33
PCGF1Q9BSM1 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PCGF1Q9BSM1 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
PCGF1Q9BSM1 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC12.99□□□□□ -0.33
PCGF1Q9BSM1 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
PCGF1Q9BSM1 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
PCGF1Q9BSM1 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PCGF1Q9BSM1 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PCGF1Q9BSM1 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
PCGF1Q9BSM1 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC12.99□□□□□ -0.33
PCGF1Q9BSM1 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC12.99□□□□□ -0.33
PCGF1Q9BSM1 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC12.99□□□□□ -0.33
PCGF1Q9BSM1 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
PCGF1Q9BSM1 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PCGF1Q9BSM1 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PCGF1Q9BSM1 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
PCGF1Q9BSM1 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC12.98□□□□□ -0.33
PCGF1Q9BSM1 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
PCGF1Q9BSM1 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC12.98□□□□□ -0.33
PCGF1Q9BSM1 AC138969.3-201ENST00000546612 1459 ntBASIC12.98□□□□□ -0.33
PCGF1Q9BSM1 AC138932.2-201ENST00000548268 1459 ntBASIC12.98□□□□□ -0.33
PCGF1Q9BSM1 AC126755.4-201ENST00000549796 1459 ntBASIC12.98□□□□□ -0.33
PCGF1Q9BSM1 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC12.98□□□□□ -0.33
PCGF1Q9BSM1 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
PCGF1Q9BSM1 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PCGF1Q9BSM1 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC12.98□□□□□ -0.33
PCGF1Q9BSM1 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC12.98□□□□□ -0.33
PCGF1Q9BSM1 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PCGF1Q9BSM1 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PCGF1Q9BSM1 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC12.98□□□□□ -0.33
PCGF1Q9BSM1 GRAP-202ENST00000395635 834 ntTSL 2 BASIC12.98□□□□□ -0.33
PCGF1Q9BSM1 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC12.98□□□□□ -0.33
PCGF1Q9BSM1 DGCR5-201ENST00000399539 862 ntBASIC12.98□□□□□ -0.33
PCGF1Q9BSM1 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC12.98□□□□□ -0.33
PCGF1Q9BSM1 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC12.98□□□□□ -0.33
PCGF1Q9BSM1 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC12.98□□□□□ -0.33
PCGF1Q9BSM1 MYCLP2-201ENST00000449268 967 ntBASIC12.98□□□□□ -0.33
PCGF1Q9BSM1 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
PCGF1Q9BSM1 AC104596.2-201ENST00000512793 793 ntBASIC12.98□□□□□ -0.33
PCGF1Q9BSM1 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC12.98□□□□□ -0.33
PCGF1Q9BSM1 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC12.98□□□□□ -0.33
PCGF1Q9BSM1 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC12.98□□□□□ -0.33
PCGF1Q9BSM1 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC12.98□□□□□ -0.33
PCGF1Q9BSM1 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC12.98□□□□□ -0.33
PCGF1Q9BSM1 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
PCGF1Q9BSM1 AC123567.1-201ENST00000548294 1261 ntBASIC12.98□□□□□ -0.33
PCGF1Q9BSM1 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC12.98□□□□□ -0.33
PCGF1Q9BSM1 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms