Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC18.51■□□□□ 0.55
CRAMP1Q96RY5 AC012508.2-201ENST00000567613 1472 ntBASIC18.51■□□□□ 0.55
CRAMP1Q96RY5 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CRAMP1Q96RY5 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CRAMP1Q96RY5 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
CRAMP1Q96RY5 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC18.5■□□□□ 0.55
CRAMP1Q96RY5 AC006058.4-201ENST00000624016 1670 ntBASIC18.5■□□□□ 0.55
CRAMP1Q96RY5 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CRAMP1Q96RY5 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC18.5■□□□□ 0.55
CRAMP1Q96RY5 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CRAMP1Q96RY5 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC18.5■□□□□ 0.55
CRAMP1Q96RY5 CICP13-201ENST00000422015 2789 ntBASIC18.5■□□□□ 0.55
CRAMP1Q96RY5 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC18.5■□□□□ 0.55
CRAMP1Q96RY5 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
CRAMP1Q96RY5 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CRAMP1Q96RY5 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CRAMP1Q96RY5 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
CRAMP1Q96RY5 NME2-201ENST00000393183 568 ntTSL 2 BASIC18.5■□□□□ 0.55
CRAMP1Q96RY5 MBP-227ENST00000526111 581 ntTSL 4 BASIC18.5■□□□□ 0.55
CRAMP1Q96RY5 AC090857.1-201ENST00000527400 390 ntBASIC18.5■□□□□ 0.55
CRAMP1Q96RY5 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC18.5■□□□□ 0.55
CRAMP1Q96RY5 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC18.5■□□□□ 0.55
CRAMP1Q96RY5 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CRAMP1Q96RY5 AC008805.1-201ENST00000590892 364 ntBASIC18.5■□□□□ 0.55
CRAMP1Q96RY5 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC18.5■□□□□ 0.55
CRAMP1Q96RY5 AC103691.2-201ENST00000618824 433 ntBASIC18.5■□□□□ 0.55
CRAMP1Q96RY5 CICP11-201ENST00000434745 2827 ntBASIC18.5■□□□□ 0.55
CRAMP1Q96RY5 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC18.5■□□□□ 0.55
CRAMP1Q96RY5 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CRAMP1Q96RY5 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC18.5■□□□□ 0.55
CRAMP1Q96RY5 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CRAMP1Q96RY5 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC18.5■□□□□ 0.55
CRAMP1Q96RY5 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CRAMP1Q96RY5 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CRAMP1Q96RY5 WT1-209ENST00000530998 2421 ntTSL 2 BASIC18.5■□□□□ 0.55
CRAMP1Q96RY5 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC18.5■□□□□ 0.55
CRAMP1Q96RY5 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CRAMP1Q96RY5 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC18.5■□□□□ 0.55
CRAMP1Q96RY5 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CRAMP1Q96RY5 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CRAMP1Q96RY5 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC18.49■□□□□ 0.55
CRAMP1Q96RY5 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CRAMP1Q96RY5 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CRAMP1Q96RY5 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CRAMP1Q96RY5 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC18.49■□□□□ 0.55
CRAMP1Q96RY5 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CRAMP1Q96RY5 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC18.49■□□□□ 0.55
CRAMP1Q96RY5 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CRAMP1Q96RY5 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CRAMP1Q96RY5 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC18.49■□□□□ 0.55
CRAMP1Q96RY5 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CRAMP1Q96RY5 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CRAMP1Q96RY5 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.49■□□□□ 0.55
CRAMP1Q96RY5 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CRAMP1Q96RY5 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CRAMP1Q96RY5 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CRAMP1Q96RY5 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CRAMP1Q96RY5 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CRAMP1Q96RY5 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CRAMP1Q96RY5 AC073150.1-201ENST00000450406 1084 ntBASIC18.49■□□□□ 0.55
CRAMP1Q96RY5 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC18.49■□□□□ 0.55
CRAMP1Q96RY5 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC18.49■□□□□ 0.55
CRAMP1Q96RY5 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
CRAMP1Q96RY5 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC18.49■□□□□ 0.55
CRAMP1Q96RY5 RN7SL555P-201ENST00000584742 339 ntBASIC18.49■□□□□ 0.55
CRAMP1Q96RY5 Z98259.2-201ENST00000641583 609 ntBASIC18.49■□□□□ 0.55
CRAMP1Q96RY5 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CRAMP1Q96RY5 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CRAMP1Q96RY5 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CRAMP1Q96RY5 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CRAMP1Q96RY5 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CRAMP1Q96RY5 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
CRAMP1Q96RY5 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CRAMP1Q96RY5 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CRAMP1Q96RY5 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CRAMP1Q96RY5 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CRAMP1Q96RY5 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CRAMP1Q96RY5 MBLAC2-202ENST00000514906 1936 ntBASIC18.49■□□□□ 0.55
CRAMP1Q96RY5 AMT-204ENST00000427987 1646 ntTSL 5 BASIC18.49■□□□□ 0.55
CRAMP1Q96RY5 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CRAMP1Q96RY5 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CRAMP1Q96RY5 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CRAMP1Q96RY5 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.48■□□□□ 0.55
CRAMP1Q96RY5 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.48■□□□□ 0.55
CRAMP1Q96RY5 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CRAMP1Q96RY5 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CRAMP1Q96RY5 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
CRAMP1Q96RY5 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC18.48■□□□□ 0.55
CRAMP1Q96RY5 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CRAMP1Q96RY5 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CRAMP1Q96RY5 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC18.48■□□□□ 0.55
CRAMP1Q96RY5 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CRAMP1Q96RY5 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC18.48■□□□□ 0.55
CRAMP1Q96RY5 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC18.48■□□□□ 0.55
CRAMP1Q96RY5 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC18.48■□□□□ 0.55
CRAMP1Q96RY5 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC18.48■□□□□ 0.55
CRAMP1Q96RY5 AC104784.1-201ENST00000473096 294 ntBASIC18.48■□□□□ 0.55
CRAMP1Q96RY5 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC18.48■□□□□ 0.55
CRAMP1Q96RY5 SCARNA21-201ENST00000517026 139 ntBASIC18.48■□□□□ 0.55
CRAMP1Q96RY5 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms