Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC16.31■□□□□ 0.2
NPAS4Q8IUM7 MSRA-203ENST00000441698 788 ntTSL 2 BASIC16.31■□□□□ 0.2
NPAS4Q8IUM7 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NPAS4Q8IUM7 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC16.31■□□□□ 0.2
NPAS4Q8IUM7 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC16.31■□□□□ 0.2
NPAS4Q8IUM7 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC16.31■□□□□ 0.2
NPAS4Q8IUM7 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NPAS4Q8IUM7 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC16.31■□□□□ 0.2
NPAS4Q8IUM7 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NPAS4Q8IUM7 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
NPAS4Q8IUM7 AL162426.1-201ENST00000624141 743 ntBASIC16.31■□□□□ 0.2
NPAS4Q8IUM7 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC16.31■□□□□ 0.2
NPAS4Q8IUM7 AC002472.3-201ENST00000640124 621 ntBASIC16.31■□□□□ 0.2
NPAS4Q8IUM7 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
NPAS4Q8IUM7 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.31■□□□□ 0.2
NPAS4Q8IUM7 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.31■□□□□ 0.2
NPAS4Q8IUM7 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
NPAS4Q8IUM7 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
NPAS4Q8IUM7 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
NPAS4Q8IUM7 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC16.31■□□□□ 0.2
NPAS4Q8IUM7 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NPAS4Q8IUM7 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NPAS4Q8IUM7 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.31■□□□□ 0.2
NPAS4Q8IUM7 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NPAS4Q8IUM7 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
NPAS4Q8IUM7 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
NPAS4Q8IUM7 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
NPAS4Q8IUM7 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NPAS4Q8IUM7 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NPAS4Q8IUM7 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.3■□□□□ 0.2
NPAS4Q8IUM7 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NPAS4Q8IUM7 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NPAS4Q8IUM7 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NPAS4Q8IUM7 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC16.3■□□□□ 0.2
NPAS4Q8IUM7 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC16.3■□□□□ 0.2
NPAS4Q8IUM7 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.3■□□□□ 0.2
NPAS4Q8IUM7 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NPAS4Q8IUM7 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC16.3■□□□□ 0.2
NPAS4Q8IUM7 NPPA-201ENST00000376476 728 ntTSL 3 BASIC16.3■□□□□ 0.2
NPAS4Q8IUM7 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
NPAS4Q8IUM7 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NPAS4Q8IUM7 PTPA-217ENST00000434095 870 ntTSL 2 BASIC16.3■□□□□ 0.2
NPAS4Q8IUM7 MAGEA5-201ENST00000446757 942 ntBASIC16.3■□□□□ 0.2
NPAS4Q8IUM7 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC16.3■□□□□ 0.2
NPAS4Q8IUM7 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC16.3■□□□□ 0.2
NPAS4Q8IUM7 SUPT4H1P2-201ENST00000501248 353 ntBASIC16.3■□□□□ 0.2
NPAS4Q8IUM7 AC024681.1-201ENST00000521917 487 ntBASIC16.3■□□□□ 0.2
NPAS4Q8IUM7 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
NPAS4Q8IUM7 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC16.3■□□□□ 0.2
NPAS4Q8IUM7 AC100827.2-201ENST00000563214 1194 ntBASIC16.3■□□□□ 0.2
NPAS4Q8IUM7 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC16.3■□□□□ 0.2
NPAS4Q8IUM7 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC16.3■□□□□ 0.2
NPAS4Q8IUM7 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NPAS4Q8IUM7 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC16.3■□□□□ 0.2
NPAS4Q8IUM7 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
NPAS4Q8IUM7 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NPAS4Q8IUM7 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
NPAS4Q8IUM7 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC16.3■□□□□ 0.2
NPAS4Q8IUM7 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.3■□□□□ 0.2
NPAS4Q8IUM7 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.3■□□□□ 0.2
NPAS4Q8IUM7 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NPAS4Q8IUM7 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC16.3■□□□□ 0.2
NPAS4Q8IUM7 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
NPAS4Q8IUM7 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC16.3■□□□□ 0.2
NPAS4Q8IUM7 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NPAS4Q8IUM7 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NPAS4Q8IUM7 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.29■□□□□ 0.2
NPAS4Q8IUM7 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC16.29■□□□□ 0.2
NPAS4Q8IUM7 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.29■□□□□ 0.2
NPAS4Q8IUM7 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.29■□□□□ 0.2
NPAS4Q8IUM7 AC008132.1-202ENST00000342005 1389 ntBASIC16.29■□□□□ 0.2
NPAS4Q8IUM7 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NPAS4Q8IUM7 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NPAS4Q8IUM7 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NPAS4Q8IUM7 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
NPAS4Q8IUM7 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NPAS4Q8IUM7 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.29■□□□□ 0.2
NPAS4Q8IUM7 AC004899.1-201ENST00000424687 1714 ntBASIC16.29■□□□□ 0.2
NPAS4Q8IUM7 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NPAS4Q8IUM7 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
NPAS4Q8IUM7 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NPAS4Q8IUM7 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
NPAS4Q8IUM7 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
NPAS4Q8IUM7 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC16.29■□□□□ 0.2
NPAS4Q8IUM7 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NPAS4Q8IUM7 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC16.29■□□□□ 0.2
NPAS4Q8IUM7 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC16.29■□□□□ 0.2
NPAS4Q8IUM7 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NPAS4Q8IUM7 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC16.29■□□□□ 0.2
NPAS4Q8IUM7 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC16.29■□□□□ 0.2
NPAS4Q8IUM7 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC16.29■□□□□ 0.2
NPAS4Q8IUM7 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
NPAS4Q8IUM7 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC16.29■□□□□ 0.2
NPAS4Q8IUM7 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NPAS4Q8IUM7 CSH2-206ENST00000560142 749 ntTSL 5 BASIC16.29■□□□□ 0.2
NPAS4Q8IUM7 FGFR3P5-201ENST00000564496 886 ntBASIC16.29■□□□□ 0.2
NPAS4Q8IUM7 AC009955.4-201ENST00000597192 544 ntBASIC16.29■□□□□ 0.2
NPAS4Q8IUM7 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NPAS4Q8IUM7 AL805961.1-203ENST00000641078 1258 ntBASIC16.29■□□□□ 0.2
NPAS4Q8IUM7 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms