Protein–RNA interactions for Protein: Q86YV9

HPS6, Hermansky-Pudlak syndrome 6 protein, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS6Q86YV9 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
HPS6Q86YV9 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HPS6Q86YV9 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HPS6Q86YV9 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HPS6Q86YV9 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HPS6Q86YV9 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HPS6Q86YV9 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC15.29■□□□□ 0.04
HPS6Q86YV9 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HPS6Q86YV9 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
HPS6Q86YV9 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
HPS6Q86YV9 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HPS6Q86YV9 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HPS6Q86YV9 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HPS6Q86YV9 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HPS6Q86YV9 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HPS6Q86YV9 CD81-202ENST00000381036 880 ntTSL 3 BASIC15.29■□□□□ 0.04
HPS6Q86YV9 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
HPS6Q86YV9 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HPS6Q86YV9 AC245100.5-201ENST00000452108 331 ntBASIC15.29■□□□□ 0.04
HPS6Q86YV9 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HPS6Q86YV9 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
HPS6Q86YV9 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HPS6Q86YV9 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC15.29■□□□□ 0.04
HPS6Q86YV9 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC15.29■□□□□ 0.04
HPS6Q86YV9 SPDYE22P-201ENST00000582158 798 ntBASIC15.29■□□□□ 0.04
HPS6Q86YV9 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC15.29■□□□□ 0.04
HPS6Q86YV9 GPER1-207ENST00000619052 571 ntTSL 2 BASIC15.29■□□□□ 0.04
HPS6Q86YV9 AL590560.3-201ENST00000623350 461 ntBASIC15.29■□□□□ 0.04
HPS6Q86YV9 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.29■□□□□ 0.04
HPS6Q86YV9 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HPS6Q86YV9 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.29■□□□□ 0.04
HPS6Q86YV9 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HPS6Q86YV9 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
HPS6Q86YV9 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HPS6Q86YV9 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
HPS6Q86YV9 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HPS6Q86YV9 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC15.29■□□□□ 0.04
HPS6Q86YV9 MIR600HG-201ENST00000449175 5984 ntBASIC15.29■□□□□ 0.04
HPS6Q86YV9 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HPS6Q86YV9 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.29■□□□□ 0.04
HPS6Q86YV9 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HPS6Q86YV9 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HPS6Q86YV9 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
HPS6Q86YV9 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HPS6Q86YV9 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
HPS6Q86YV9 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.29■□□□□ 0.04
HPS6Q86YV9 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HPS6Q86YV9 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
HPS6Q86YV9 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
HPS6Q86YV9 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HPS6Q86YV9 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
HPS6Q86YV9 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.28■□□□□ 0.04
HPS6Q86YV9 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
HPS6Q86YV9 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC15.28■□□□□ 0.04
HPS6Q86YV9 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
HPS6Q86YV9 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HPS6Q86YV9 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HPS6Q86YV9 AC100757.3-201ENST00000622361 1406 ntBASIC15.28■□□□□ 0.04
HPS6Q86YV9 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HPS6Q86YV9 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HPS6Q86YV9 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HPS6Q86YV9 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.28■□□□□ 0.04
HPS6Q86YV9 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HPS6Q86YV9 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.28■□□□□ 0.04
HPS6Q86YV9 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
HPS6Q86YV9 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.28■□□□□ 0.04
HPS6Q86YV9 AC023024.2-201ENST00000623561 1993 ntBASIC15.28■□□□□ 0.04
HPS6Q86YV9 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HPS6Q86YV9 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HPS6Q86YV9 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
HPS6Q86YV9 CALY-202ENST00000368555 783 ntTSL 2 BASIC15.28■□□□□ 0.04
HPS6Q86YV9 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HPS6Q86YV9 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HPS6Q86YV9 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC15.28■□□□□ 0.04
HPS6Q86YV9 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC15.28■□□□□ 0.04
HPS6Q86YV9 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC15.28■□□□□ 0.04
HPS6Q86YV9 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC15.28■□□□□ 0.04
HPS6Q86YV9 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC15.28■□□□□ 0.04
HPS6Q86YV9 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC15.28■□□□□ 0.04
HPS6Q86YV9 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC15.28■□□□□ 0.04
HPS6Q86YV9 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC15.28■□□□□ 0.04
HPS6Q86YV9 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.28■□□□□ 0.04
HPS6Q86YV9 AC004233.3-201ENST00000607794 1269 ntBASIC15.28■□□□□ 0.04
HPS6Q86YV9 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC15.28■□□□□ 0.04
HPS6Q86YV9 RAB34-223ENST00000636154 730 ntTSL 2 BASIC15.28■□□□□ 0.04
HPS6Q86YV9 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
HPS6Q86YV9 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HPS6Q86YV9 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
HPS6Q86YV9 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HPS6Q86YV9 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HPS6Q86YV9 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.28■□□□□ 0.04
HPS6Q86YV9 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.28■□□□□ 0.04
HPS6Q86YV9 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HPS6Q86YV9 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HPS6Q86YV9 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
HPS6Q86YV9 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HPS6Q86YV9 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC15.28■□□□□ 0.04
HPS6Q86YV9 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HPS6Q86YV9 AC022144.1-201ENST00000602255 1580 ntBASIC15.28■□□□□ 0.04
HPS6Q86YV9 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms