Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smarcd3Q6P9Z1 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Smarcd3Q6P9Z1 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smarcd3Q6P9Z1 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smarcd3Q6P9Z1 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smarcd3Q6P9Z1 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smarcd3Q6P9Z1 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Smarcd3Q6P9Z1 Gm5422-201ENSMUST00000050717 2721 ntBASIC11.29□□□□□ -0.6
Smarcd3Q6P9Z1 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Smarcd3Q6P9Z1 Gm11478-201ENSMUST00000117851 599 ntBASIC11.29□□□□□ -0.6
Smarcd3Q6P9Z1 Gm15806-201ENSMUST00000120696 955 ntBASIC11.29□□□□□ -0.6
Smarcd3Q6P9Z1 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC11.29□□□□□ -0.6
Smarcd3Q6P9Z1 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Smarcd3Q6P9Z1 Gm24644-201ENSMUST00000157114 139 ntBASIC11.29□□□□□ -0.6
Smarcd3Q6P9Z1 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smarcd3Q6P9Z1 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Smarcd3Q6P9Z1 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC11.29□□□□□ -0.6
Smarcd3Q6P9Z1 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Smarcd3Q6P9Z1 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC11.29□□□□□ -0.6
Smarcd3Q6P9Z1 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Smarcd3Q6P9Z1 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smarcd3Q6P9Z1 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smarcd3Q6P9Z1 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smarcd3Q6P9Z1 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Smarcd3Q6P9Z1 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Smarcd3Q6P9Z1 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smarcd3Q6P9Z1 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
Smarcd3Q6P9Z1 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Smarcd3Q6P9Z1 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.29□□□□□ -0.6
Smarcd3Q6P9Z1 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Smarcd3Q6P9Z1 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Smarcd3Q6P9Z1 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC11.29□□□□□ -0.6
Smarcd3Q6P9Z1 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smarcd3Q6P9Z1 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Smarcd3Q6P9Z1 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC11.29□□□□□ -0.6
Smarcd3Q6P9Z1 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smarcd3Q6P9Z1 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smarcd3Q6P9Z1 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smarcd3Q6P9Z1 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smarcd3Q6P9Z1 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC11.29□□□□□ -0.6
Smarcd3Q6P9Z1 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smarcd3Q6P9Z1 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smarcd3Q6P9Z1 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Smarcd3Q6P9Z1 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smarcd3Q6P9Z1 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Smarcd3Q6P9Z1 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smarcd3Q6P9Z1 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smarcd3Q6P9Z1 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC11.28□□□□□ -0.6
Smarcd3Q6P9Z1 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smarcd3Q6P9Z1 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC11.28□□□□□ -0.6
Smarcd3Q6P9Z1 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Smarcd3Q6P9Z1 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smarcd3Q6P9Z1 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smarcd3Q6P9Z1 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smarcd3Q6P9Z1 Gm43061-201ENSMUST00000198850 2241 ntBASIC11.28□□□□□ -0.6
Smarcd3Q6P9Z1 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smarcd3Q6P9Z1 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smarcd3Q6P9Z1 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Smarcd3Q6P9Z1 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Smarcd3Q6P9Z1 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smarcd3Q6P9Z1 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Smarcd3Q6P9Z1 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smarcd3Q6P9Z1 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smarcd3Q6P9Z1 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smarcd3Q6P9Z1 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Smarcd3Q6P9Z1 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC11.28□□□□□ -0.6
Smarcd3Q6P9Z1 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Smarcd3Q6P9Z1 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smarcd3Q6P9Z1 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smarcd3Q6P9Z1 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Smarcd3Q6P9Z1 Gm44831-201ENSMUST00000208469 2989 ntBASIC11.28□□□□□ -0.6
Smarcd3Q6P9Z1 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Smarcd3Q6P9Z1 AC069562.3-201ENSMUST00000225387 587 ntBASIC11.28□□□□□ -0.6
Smarcd3Q6P9Z1 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smarcd3Q6P9Z1 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smarcd3Q6P9Z1 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smarcd3Q6P9Z1 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smarcd3Q6P9Z1 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smarcd3Q6P9Z1 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smarcd3Q6P9Z1 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smarcd3Q6P9Z1 Gm15163-201ENSMUST00000120749 1302 ntBASIC11.28□□□□□ -0.6
Smarcd3Q6P9Z1 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smarcd3Q6P9Z1 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smarcd3Q6P9Z1 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smarcd3Q6P9Z1 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smarcd3Q6P9Z1 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smarcd3Q6P9Z1 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smarcd3Q6P9Z1 Gm43823-201ENSMUST00000197391 1808 ntBASIC11.28□□□□□ -0.6
Smarcd3Q6P9Z1 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smarcd3Q6P9Z1 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Smarcd3Q6P9Z1 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Smarcd3Q6P9Z1 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Smarcd3Q6P9Z1 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Smarcd3Q6P9Z1 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Smarcd3Q6P9Z1 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.27□□□□□ -0.6
Smarcd3Q6P9Z1 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Smarcd3Q6P9Z1 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC11.27□□□□□ -0.6
Smarcd3Q6P9Z1 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Smarcd3Q6P9Z1 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC11.27□□□□□ -0.6
Smarcd3Q6P9Z1 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 92.4 ms