Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB28P51157 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB28P51157 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
RAB28P51157 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB28P51157 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
RAB28P51157 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB28P51157 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RAB28P51157 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB28P51157 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB28P51157 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB28P51157 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
RAB28P51157 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.84□□□□□ -0.03
RAB28P51157 AC126177.1-201ENST00000547829 2218 ntBASIC14.84□□□□□ -0.03
RAB28P51157 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB28P51157 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RAB28P51157 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC14.83□□□□□ -0.03
RAB28P51157 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
RAB28P51157 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.83□□□□□ -0.03
RAB28P51157 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
RAB28P51157 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
RAB28P51157 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RAB28P51157 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RAB28P51157 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RAB28P51157 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RAB28P51157 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.83□□□□□ -0.03
RAB28P51157 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RAB28P51157 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
RAB28P51157 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAB28P51157 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAB28P51157 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.83□□□□□ -0.04
RAB28P51157 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAB28P51157 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.83□□□□□ -0.04
RAB28P51157 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
RAB28P51157 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAB28P51157 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.83□□□□□ -0.04
RAB28P51157 RNU1-114P-201ENST00000365297 166 ntBASIC14.83□□□□□ -0.04
RAB28P51157 MGST3-203ENST00000367885 680 ntTSL 2 BASIC14.83□□□□□ -0.04
RAB28P51157 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAB28P51157 BAATP1-201ENST00000412284 1225 ntBASIC14.83□□□□□ -0.04
RAB28P51157 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC14.83□□□□□ -0.04
RAB28P51157 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAB28P51157 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC14.83□□□□□ -0.04
RAB28P51157 AC012441.1-201ENST00000446669 685 ntBASIC14.83□□□□□ -0.04
RAB28P51157 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.83□□□□□ -0.04
RAB28P51157 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC14.83□□□□□ -0.04
RAB28P51157 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
RAB28P51157 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
RAB28P51157 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC14.83□□□□□ -0.04
RAB28P51157 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC14.83□□□□□ -0.04
RAB28P51157 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
RAB28P51157 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RAB28P51157 AC008735.3-201ENST00000596646 500 ntBASIC14.83□□□□□ -0.04
RAB28P51157 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC14.83□□□□□ -0.04
RAB28P51157 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC14.83□□□□□ -0.04
RAB28P51157 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC14.83□□□□□ -0.04
RAB28P51157 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
RAB28P51157 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
RAB28P51157 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAB28P51157 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
RAB28P51157 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.04
RAB28P51157 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
RAB28P51157 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
RAB28P51157 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAB28P51157 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
RAB28P51157 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.83□□□□□ -0.04
RAB28P51157 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
RAB28P51157 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
RAB28P51157 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAB28P51157 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RAB28P51157 WASH3P-207ENST00000560956 1394 ntBASIC14.83□□□□□ -0.04
RAB28P51157 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAB28P51157 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAB28P51157 MST1L-201ENST00000442552 2185 ntBASIC14.83□□□□□ -0.04
RAB28P51157 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RAB28P51157 AC006486.2-201ENST00000624246 2199 ntBASIC14.83□□□□□ -0.04
RAB28P51157 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAB28P51157 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
RAB28P51157 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC14.82□□□□□ -0.04
RAB28P51157 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.82□□□□□ -0.04
RAB28P51157 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.82□□□□□ -0.04
RAB28P51157 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
RAB28P51157 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
RAB28P51157 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.82□□□□□ -0.04
RAB28P51157 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
RAB28P51157 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
RAB28P51157 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAB28P51157 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC14.82□□□□□ -0.04
RAB28P51157 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAB28P51157 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAB28P51157 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
RAB28P51157 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAB28P51157 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
RAB28P51157 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
RAB28P51157 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAB28P51157 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RAB28P51157 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RAB28P51157 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAB28P51157 AL139094.1-201ENST00000405549 1188 ntBASIC14.82□□□□□ -0.04
RAB28P51157 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC14.82□□□□□ -0.04
RAB28P51157 KLF2P2-201ENST00000416807 1039 ntBASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms