Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CYP3A4P08684 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CYP3A4P08684 TPM3P8-201ENST00000330554 643 ntBASIC17.18■□□□□ 0.34
CYP3A4P08684 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CYP3A4P08684 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC17.18■□□□□ 0.34
CYP3A4P08684 AC026954.1-201ENST00000429771 1293 ntBASIC17.18■□□□□ 0.34
CYP3A4P08684 AHRR-211ENST00000515206 462 ntTSL 5 BASIC17.18■□□□□ 0.34
CYP3A4P08684 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC17.18■□□□□ 0.34
CYP3A4P08684 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC17.18■□□□□ 0.34
CYP3A4P08684 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC17.18■□□□□ 0.34
CYP3A4P08684 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC17.18■□□□□ 0.34
CYP3A4P08684 RPS15-202ENST00000585665 467 ntTSL 3 BASIC17.18■□□□□ 0.34
CYP3A4P08684 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC17.18■□□□□ 0.34
CYP3A4P08684 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CYP3A4P08684 AC008687.7-202ENST00000637404 953 ntBASIC17.18■□□□□ 0.34
CYP3A4P08684 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CYP3A4P08684 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC17.18■□□□□ 0.34
CYP3A4P08684 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CYP3A4P08684 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
CYP3A4P08684 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CYP3A4P08684 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CYP3A4P08684 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CYP3A4P08684 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
CYP3A4P08684 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC17.18■□□□□ 0.34
CYP3A4P08684 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CYP3A4P08684 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.18■□□□□ 0.34
CYP3A4P08684 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CYP3A4P08684 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CYP3A4P08684 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CYP3A4P08684 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CYP3A4P08684 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CYP3A4P08684 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC17.17■□□□□ 0.34
CYP3A4P08684 AC023157.3-201ENST00000619086 2088 ntBASIC17.17■□□□□ 0.34
CYP3A4P08684 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CYP3A4P08684 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CYP3A4P08684 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CYP3A4P08684 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CYP3A4P08684 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CYP3A4P08684 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CYP3A4P08684 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CYP3A4P08684 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CYP3A4P08684 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CYP3A4P08684 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
CYP3A4P08684 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC17.17■□□□□ 0.34
CYP3A4P08684 AL590640.2-201ENST00000457038 527 ntBASIC17.17■□□□□ 0.34
CYP3A4P08684 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CYP3A4P08684 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC17.17■□□□□ 0.34
CYP3A4P08684 MESTP3-201ENST00000503460 968 ntBASIC17.17■□□□□ 0.34
CYP3A4P08684 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC17.17■□□□□ 0.34
CYP3A4P08684 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC17.17■□□□□ 0.34
CYP3A4P08684 NAA38-206ENST00000576384 424 ntTSL 2 BASIC17.17■□□□□ 0.34
CYP3A4P08684 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC17.17■□□□□ 0.34
CYP3A4P08684 ECM1P1-201ENST00000604092 1279 ntBASIC17.17■□□□□ 0.34
CYP3A4P08684 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CYP3A4P08684 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC17.17■□□□□ 0.34
CYP3A4P08684 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CYP3A4P08684 AC138951.2-201ENST00000623455 1161 ntBASIC17.17■□□□□ 0.34
CYP3A4P08684 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CYP3A4P08684 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CYP3A4P08684 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CYP3A4P08684 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CYP3A4P08684 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC17.17■□□□□ 0.34
CYP3A4P08684 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC17.17■□□□□ 0.34
CYP3A4P08684 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CYP3A4P08684 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CYP3A4P08684 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC17.17■□□□□ 0.34
CYP3A4P08684 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CYP3A4P08684 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CYP3A4P08684 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
CYP3A4P08684 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CYP3A4P08684 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CYP3A4P08684 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CYP3A4P08684 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CYP3A4P08684 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CYP3A4P08684 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CYP3A4P08684 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CYP3A4P08684 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
CYP3A4P08684 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CYP3A4P08684 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.16■□□□□ 0.34
CYP3A4P08684 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CYP3A4P08684 MBP-202ENST00000355994 2772 ntTSL 5 BASIC17.16■□□□□ 0.34
CYP3A4P08684 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CYP3A4P08684 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CYP3A4P08684 HLA-V-201ENST00000429037 534 ntBASIC17.16■□□□□ 0.34
CYP3A4P08684 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC17.16■□□□□ 0.34
CYP3A4P08684 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CYP3A4P08684 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CYP3A4P08684 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC17.16■□□□□ 0.34
CYP3A4P08684 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CYP3A4P08684 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CYP3A4P08684 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC17.16■□□□□ 0.34
CYP3A4P08684 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC17.16■□□□□ 0.34
CYP3A4P08684 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC17.16■□□□□ 0.34
CYP3A4P08684 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC17.16■□□□□ 0.34
CYP3A4P08684 Six3os1_5.1-201ENST00000611000 271 ntBASIC17.16■□□□□ 0.34
CYP3A4P08684 MIR6752-201ENST00000618442 71 ntBASIC17.16■□□□□ 0.34
CYP3A4P08684 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CYP3A4P08684 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
CYP3A4P08684 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CYP3A4P08684 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms