Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
SRRM3A6NNA2 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SRRM3A6NNA2 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
SRRM3A6NNA2 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SRRM3A6NNA2 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
SRRM3A6NNA2 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
SRRM3A6NNA2 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.03■□□□□ 0.16
SRRM3A6NNA2 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SRRM3A6NNA2 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC16.03■□□□□ 0.16
SRRM3A6NNA2 PKD1P5-201ENST00000532415 10291 ntBASIC16.03■□□□□ 0.16
SRRM3A6NNA2 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC16.03■□□□□ 0.16
SRRM3A6NNA2 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC16.03■□□□□ 0.16
SRRM3A6NNA2 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SRRM3A6NNA2 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SRRM3A6NNA2 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
SRRM3A6NNA2 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC16.03■□□□□ 0.16
SRRM3A6NNA2 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SRRM3A6NNA2 AC092506.1-202ENST00000401022 528 ntBASIC16.03■□□□□ 0.16
SRRM3A6NNA2 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.03■□□□□ 0.16
SRRM3A6NNA2 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.03■□□□□ 0.16
SRRM3A6NNA2 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
SRRM3A6NNA2 AC011495.1-201ENST00000498085 584 ntBASIC16.03■□□□□ 0.16
SRRM3A6NNA2 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC16.03■□□□□ 0.16
SRRM3A6NNA2 MIR4538-201ENST00000581377 78 ntBASIC16.03■□□□□ 0.16
SRRM3A6NNA2 MIR4259-201ENST00000584466 101 ntBASIC16.03■□□□□ 0.16
SRRM3A6NNA2 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.03■□□□□ 0.16
SRRM3A6NNA2 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC16.03■□□□□ 0.16
SRRM3A6NNA2 GPR182-203ENST00000622922 591 ntBASIC16.03■□□□□ 0.16
SRRM3A6NNA2 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC16.03■□□□□ 0.16
SRRM3A6NNA2 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
SRRM3A6NNA2 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC16.03■□□□□ 0.16
SRRM3A6NNA2 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SRRM3A6NNA2 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
SRRM3A6NNA2 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SRRM3A6NNA2 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
SRRM3A6NNA2 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
SRRM3A6NNA2 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SRRM3A6NNA2 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SRRM3A6NNA2 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SRRM3A6NNA2 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
SRRM3A6NNA2 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
SRRM3A6NNA2 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC16.03■□□□□ 0.16
SRRM3A6NNA2 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SRRM3A6NNA2 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.03■□□□□ 0.16
SRRM3A6NNA2 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
SRRM3A6NNA2 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SRRM3A6NNA2 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
SRRM3A6NNA2 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC16.03■□□□□ 0.16
SRRM3A6NNA2 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SRRM3A6NNA2 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SRRM3A6NNA2 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SRRM3A6NNA2 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.02■□□□□ 0.16
SRRM3A6NNA2 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC16.02■□□□□ 0.16
SRRM3A6NNA2 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SRRM3A6NNA2 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
SRRM3A6NNA2 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SRRM3A6NNA2 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SRRM3A6NNA2 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
SRRM3A6NNA2 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
SRRM3A6NNA2 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SRRM3A6NNA2 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
SRRM3A6NNA2 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC16.02■□□□□ 0.16
SRRM3A6NNA2 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SRRM3A6NNA2 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
SRRM3A6NNA2 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC16.02■□□□□ 0.16
SRRM3A6NNA2 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SRRM3A6NNA2 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
SRRM3A6NNA2 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
SRRM3A6NNA2 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.02■□□□□ 0.16
SRRM3A6NNA2 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SRRM3A6NNA2 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SRRM3A6NNA2 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC16.02■□□□□ 0.16
SRRM3A6NNA2 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.02■□□□□ 0.16
SRRM3A6NNA2 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.02■□□□□ 0.16
SRRM3A6NNA2 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
SRRM3A6NNA2 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC16.02■□□□□ 0.16
SRRM3A6NNA2 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.02■□□□□ 0.16
SRRM3A6NNA2 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.02■□□□□ 0.16
SRRM3A6NNA2 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.02■□□□□ 0.16
SRRM3A6NNA2 PFAS-212ENST00000625942 396 ntTSL 5 BASIC16.02■□□□□ 0.16
SRRM3A6NNA2 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
SRRM3A6NNA2 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
SRRM3A6NNA2 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC16.02■□□□□ 0.15
SRRM3A6NNA2 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SRRM3A6NNA2 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.02■□□□□ 0.15
SRRM3A6NNA2 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
SRRM3A6NNA2 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
SRRM3A6NNA2 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
SRRM3A6NNA2 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC16.02■□□□□ 0.15
SRRM3A6NNA2 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC16.02■□□□□ 0.15
SRRM3A6NNA2 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.15
SRRM3A6NNA2 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
SRRM3A6NNA2 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
SRRM3A6NNA2 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC16.02■□□□□ 0.15
SRRM3A6NNA2 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SRRM3A6NNA2 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SRRM3A6NNA2 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SRRM3A6NNA2 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SRRM3A6NNA2 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC16.01■□□□□ 0.15
SRRM3A6NNA2 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms