Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
TCRBV4S1A1TA0A5B7 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
TCRBV4S1A1TA0A5B7 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC12.46□□□□□ -0.42
TCRBV4S1A1TA0A5B7 TPO-203ENST00000346956 2923 ntTSL 5 BASIC12.46□□□□□ -0.42
TCRBV4S1A1TA0A5B7 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
TCRBV4S1A1TA0A5B7 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
TCRBV4S1A1TA0A5B7 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
TCRBV4S1A1TA0A5B7 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
TCRBV4S1A1TA0A5B7 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC12.46□□□□□ -0.42
TCRBV4S1A1TA0A5B7 AC126365.1-201ENST00000578585 1514 ntBASIC12.46□□□□□ -0.42
TCRBV4S1A1TA0A5B7 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
TCRBV4S1A1TA0A5B7 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
TCRBV4S1A1TA0A5B7 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
TCRBV4S1A1TA0A5B7 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
TCRBV4S1A1TA0A5B7 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TCRBV4S1A1TA0A5B7 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC12.45□□□□□ -0.42
TCRBV4S1A1TA0A5B7 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC12.45□□□□□ -0.42
TCRBV4S1A1TA0A5B7 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TCRBV4S1A1TA0A5B7 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
TCRBV4S1A1TA0A5B7 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TCRBV4S1A1TA0A5B7 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
TCRBV4S1A1TA0A5B7 REXO1L1P-202ENST00000608646 1974 ntBASIC12.45□□□□□ -0.42
TCRBV4S1A1TA0A5B7 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TCRBV4S1A1TA0A5B7 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TCRBV4S1A1TA0A5B7 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC12.45□□□□□ -0.42
TCRBV4S1A1TA0A5B7 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TCRBV4S1A1TA0A5B7 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC12.45□□□□□ -0.42
TCRBV4S1A1TA0A5B7 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
TCRBV4S1A1TA0A5B7 BNIP3P1-202ENST00000550043 1585 ntBASIC12.45□□□□□ -0.42
TCRBV4S1A1TA0A5B7 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC12.45□□□□□ -0.42
TCRBV4S1A1TA0A5B7 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TCRBV4S1A1TA0A5B7 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TCRBV4S1A1TA0A5B7 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
TCRBV4S1A1TA0A5B7 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
TCRBV4S1A1TA0A5B7 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TCRBV4S1A1TA0A5B7 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
TCRBV4S1A1TA0A5B7 RAC2-202ENST00000401529 569 ntTSL 4 BASIC12.45□□□□□ -0.42
TCRBV4S1A1TA0A5B7 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC12.45□□□□□ -0.42
TCRBV4S1A1TA0A5B7 COX5BP8-201ENST00000416911 349 ntBASIC12.45□□□□□ -0.42
TCRBV4S1A1TA0A5B7 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC12.45□□□□□ -0.42
TCRBV4S1A1TA0A5B7 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
TCRBV4S1A1TA0A5B7 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC12.45□□□□□ -0.42
TCRBV4S1A1TA0A5B7 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC12.45□□□□□ -0.42
TCRBV4S1A1TA0A5B7 RN7SL752P-201ENST00000463779 287 ntBASIC12.45□□□□□ -0.42
TCRBV4S1A1TA0A5B7 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC12.45□□□□□ -0.42
TCRBV4S1A1TA0A5B7 SPDYE18-201ENST00000510091 1050 ntBASIC12.45□□□□□ -0.42
TCRBV4S1A1TA0A5B7 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC12.45□□□□□ -0.42
TCRBV4S1A1TA0A5B7 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC12.45□□□□□ -0.42
TCRBV4S1A1TA0A5B7 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC12.45□□□□□ -0.42
TCRBV4S1A1TA0A5B7 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
TCRBV4S1A1TA0A5B7 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC12.45□□□□□ -0.42
TCRBV4S1A1TA0A5B7 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC12.45□□□□□ -0.42
TCRBV4S1A1TA0A5B7 AC008494.3-201ENST00000606615 944 ntBASIC12.45□□□□□ -0.42
TCRBV4S1A1TA0A5B7 AC074044.1-201ENST00000609673 707 ntBASIC12.45□□□□□ -0.42
TCRBV4S1A1TA0A5B7 SRP9-204ENST00000619790 377 ntTSL 2 BASIC12.45□□□□□ -0.42
TCRBV4S1A1TA0A5B7 AC007431.3-201ENST00000623221 587 ntBASIC12.45□□□□□ -0.42
TCRBV4S1A1TA0A5B7 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
TCRBV4S1A1TA0A5B7 AC127383.1-201ENST00000444697 1800 ntBASIC12.45□□□□□ -0.42
TCRBV4S1A1TA0A5B7 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TCRBV4S1A1TA0A5B7 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TCRBV4S1A1TA0A5B7 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC12.45□□□□□ -0.42
TCRBV4S1A1TA0A5B7 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TCRBV4S1A1TA0A5B7 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
TCRBV4S1A1TA0A5B7 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
TCRBV4S1A1TA0A5B7 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
TCRBV4S1A1TA0A5B7 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC12.45□□□□□ -0.42
TCRBV4S1A1TA0A5B7 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC12.45□□□□□ -0.42
TCRBV4S1A1TA0A5B7 AC009090.5-201ENST00000624886 2285 ntBASIC12.45□□□□□ -0.42
TCRBV4S1A1TA0A5B7 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC12.45□□□□□ -0.42
TCRBV4S1A1TA0A5B7 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC12.45□□□□□ -0.42
TCRBV4S1A1TA0A5B7 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
TCRBV4S1A1TA0A5B7 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
TCRBV4S1A1TA0A5B7 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
TCRBV4S1A1TA0A5B7 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC12.45□□□□□ -0.42
TCRBV4S1A1TA0A5B7 AC018892.3-201ENST00000623986 2499 ntBASIC12.45□□□□□ -0.42
TCRBV4S1A1TA0A5B7 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TCRBV4S1A1TA0A5B7 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC12.45□□□□□ -0.42
TCRBV4S1A1TA0A5B7 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC12.45□□□□□ -0.42
TCRBV4S1A1TA0A5B7 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
TCRBV4S1A1TA0A5B7 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TCRBV4S1A1TA0A5B7 SLC7A15P-201ENST00000424028 1363 ntBASIC12.44□□□□□ -0.42
TCRBV4S1A1TA0A5B7 KRT8P44-201ENST00000441609 1350 ntBASIC12.44□□□□□ -0.42
TCRBV4S1A1TA0A5B7 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
TCRBV4S1A1TA0A5B7 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TCRBV4S1A1TA0A5B7 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TCRBV4S1A1TA0A5B7 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC12.44□□□□□ -0.42
TCRBV4S1A1TA0A5B7 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC12.44□□□□□ -0.42
TCRBV4S1A1TA0A5B7 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
TCRBV4S1A1TA0A5B7 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC12.44□□□□□ -0.42
TCRBV4S1A1TA0A5B7 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TCRBV4S1A1TA0A5B7 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TCRBV4S1A1TA0A5B7 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
TCRBV4S1A1TA0A5B7 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TCRBV4S1A1TA0A5B7 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TCRBV4S1A1TA0A5B7 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC12.44□□□□□ -0.42
TCRBV4S1A1TA0A5B7 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TCRBV4S1A1TA0A5B7 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TCRBV4S1A1TA0A5B7 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TCRBV4S1A1TA0A5B7 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TCRBV4S1A1TA0A5B7 DGCR5-201ENST00000399539 862 ntBASIC12.44□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms