Protein–RNA interactions for Protein: Q3UP38

Cracr2a, EF-hand calcium-binding domain-containing protein 4B, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cracr2aQ3UP38 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cracr2aQ3UP38 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cracr2aQ3UP38 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Cracr2aQ3UP38 Gm45266-201ENSMUST00000210111 2173 ntBASIC13.49□□□□□ -0.25
Cracr2aQ3UP38 AC157950.1-201ENSMUST00000217561 2168 ntBASIC13.49□□□□□ -0.25
Cracr2aQ3UP38 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC13.49□□□□□ -0.25
Cracr2aQ3UP38 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cracr2aQ3UP38 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC13.49□□□□□ -0.25
Cracr2aQ3UP38 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cracr2aQ3UP38 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Cracr2aQ3UP38 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Cracr2aQ3UP38 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Cracr2aQ3UP38 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cracr2aQ3UP38 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cracr2aQ3UP38 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Cracr2aQ3UP38 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cracr2aQ3UP38 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cracr2aQ3UP38 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cracr2aQ3UP38 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cracr2aQ3UP38 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cracr2aQ3UP38 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC13.49□□□□□ -0.25
Cracr2aQ3UP38 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cracr2aQ3UP38 Gm13394-201ENSMUST00000121658 1000 ntBASIC13.49□□□□□ -0.25
Cracr2aQ3UP38 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC13.49□□□□□ -0.25
Cracr2aQ3UP38 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cracr2aQ3UP38 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cracr2aQ3UP38 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cracr2aQ3UP38 Gm7118-201ENSMUST00000200167 1003 ntBASIC13.49□□□□□ -0.25
Cracr2aQ3UP38 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cracr2aQ3UP38 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cracr2aQ3UP38 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cracr2aQ3UP38 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cracr2aQ3UP38 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cracr2aQ3UP38 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cracr2aQ3UP38 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC13.49□□□□□ -0.25
Cracr2aQ3UP38 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cracr2aQ3UP38 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cracr2aQ3UP38 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC13.49□□□□□ -0.25
Cracr2aQ3UP38 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cracr2aQ3UP38 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cracr2aQ3UP38 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cracr2aQ3UP38 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cracr2aQ3UP38 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cracr2aQ3UP38 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cracr2aQ3UP38 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Cracr2aQ3UP38 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cracr2aQ3UP38 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cracr2aQ3UP38 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cracr2aQ3UP38 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cracr2aQ3UP38 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Cracr2aQ3UP38 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cracr2aQ3UP38 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cracr2aQ3UP38 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cracr2aQ3UP38 CT025678.1-201ENSMUST00000214795 2972 ntBASIC13.48□□□□□ -0.25
Cracr2aQ3UP38 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cracr2aQ3UP38 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cracr2aQ3UP38 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC13.48□□□□□ -0.25
Cracr2aQ3UP38 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cracr2aQ3UP38 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cracr2aQ3UP38 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cracr2aQ3UP38 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cracr2aQ3UP38 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cracr2aQ3UP38 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cracr2aQ3UP38 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Cracr2aQ3UP38 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC13.48□□□□□ -0.25
Cracr2aQ3UP38 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC13.48□□□□□ -0.25
Cracr2aQ3UP38 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC13.48□□□□□ -0.25
Cracr2aQ3UP38 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC13.48□□□□□ -0.25
Cracr2aQ3UP38 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cracr2aQ3UP38 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC13.48□□□□□ -0.25
Cracr2aQ3UP38 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC13.48□□□□□ -0.25
Cracr2aQ3UP38 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cracr2aQ3UP38 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Cracr2aQ3UP38 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cracr2aQ3UP38 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cracr2aQ3UP38 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cracr2aQ3UP38 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cracr2aQ3UP38 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cracr2aQ3UP38 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cracr2aQ3UP38 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cracr2aQ3UP38 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Cracr2aQ3UP38 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cracr2aQ3UP38 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cracr2aQ3UP38 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cracr2aQ3UP38 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cracr2aQ3UP38 Retreg1-206ENSMUST00000228306 1430 ntBASIC13.47□□□□□ -0.25
Cracr2aQ3UP38 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cracr2aQ3UP38 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cracr2aQ3UP38 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cracr2aQ3UP38 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cracr2aQ3UP38 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cracr2aQ3UP38 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cracr2aQ3UP38 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Cracr2aQ3UP38 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cracr2aQ3UP38 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cracr2aQ3UP38 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cracr2aQ3UP38 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cracr2aQ3UP38 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cracr2aQ3UP38 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cracr2aQ3UP38 Gm13315-201ENSMUST00000120376 991 ntBASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms