Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.86■□□□□ 0.13
ERCC2P18074 AC068418.2-201ENST00000577309 3703 ntBASIC15.86■□□□□ 0.13
ERCC2P18074 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.86■□□□□ 0.13
ERCC2P18074 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ERCC2P18074 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ERCC2P18074 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
ERCC2P18074 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ERCC2P18074 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
ERCC2P18074 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
ERCC2P18074 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
ERCC2P18074 AL138799.1-201ENST00000448213 1675 ntBASIC15.86■□□□□ 0.13
ERCC2P18074 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ERCC2P18074 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
ERCC2P18074 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ERCC2P18074 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ERCC2P18074 INTS4P2-202ENST00000614726 2019 ntBASIC15.85■□□□□ 0.13
ERCC2P18074 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.85■□□□□ 0.13
ERCC2P18074 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
ERCC2P18074 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ERCC2P18074 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ERCC2P18074 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ERCC2P18074 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
ERCC2P18074 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
ERCC2P18074 LINC00528-201ENST00000600723 2160 ntBASIC15.85■□□□□ 0.13
ERCC2P18074 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
ERCC2P18074 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.85■□□□□ 0.13
ERCC2P18074 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ERCC2P18074 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
ERCC2P18074 AC134915.1-201ENST00000426461 574 ntBASIC15.85■□□□□ 0.13
ERCC2P18074 AL442647.2-201ENST00000429864 857 ntBASIC15.85■□□□□ 0.13
ERCC2P18074 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC15.85■□□□□ 0.13
ERCC2P18074 GALT-202ENST00000450095 1280 ntTSL 2 BASIC15.85■□□□□ 0.13
ERCC2P18074 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
ERCC2P18074 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC15.85■□□□□ 0.13
ERCC2P18074 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC15.85■□□□□ 0.13
ERCC2P18074 POLD4-211ENST00000539074 714 ntTSL 3 BASIC15.85■□□□□ 0.13
ERCC2P18074 AC120045.2-201ENST00000567334 178 ntBASIC15.85■□□□□ 0.13
ERCC2P18074 INO80C-210ENST00000590757 595 ntTSL 2 BASIC15.85■□□□□ 0.13
ERCC2P18074 TMEM261P1-201ENST00000604899 340 ntBASIC15.85■□□□□ 0.13
ERCC2P18074 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ERCC2P18074 ZBED1P1-201ENST00000502364 1930 ntBASIC15.85■□□□□ 0.13
ERCC2P18074 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ERCC2P18074 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
ERCC2P18074 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
ERCC2P18074 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
ERCC2P18074 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ERCC2P18074 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
ERCC2P18074 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ERCC2P18074 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.85■□□□□ 0.13
ERCC2P18074 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.85■□□□□ 0.13
ERCC2P18074 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
ERCC2P18074 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
ERCC2P18074 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
ERCC2P18074 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
ERCC2P18074 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
ERCC2P18074 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ERCC2P18074 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ERCC2P18074 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ERCC2P18074 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
ERCC2P18074 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ERCC2P18074 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ERCC2P18074 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
ERCC2P18074 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
ERCC2P18074 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15.84■□□□□ 0.13
ERCC2P18074 AC012508.2-201ENST00000567613 1472 ntBASIC15.84■□□□□ 0.13
ERCC2P18074 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
ERCC2P18074 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.84■□□□□ 0.13
ERCC2P18074 AC007787.1-201ENST00000588095 1583 ntBASIC15.84■□□□□ 0.13
ERCC2P18074 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ERCC2P18074 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ERCC2P18074 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.84■□□□□ 0.13
ERCC2P18074 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ERCC2P18074 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ERCC2P18074 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.84■□□□□ 0.13
ERCC2P18074 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
ERCC2P18074 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
ERCC2P18074 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ERCC2P18074 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
ERCC2P18074 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ERCC2P18074 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.84■□□□□ 0.13
ERCC2P18074 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.84■□□□□ 0.13
ERCC2P18074 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ERCC2P18074 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ERCC2P18074 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ERCC2P18074 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC15.84■□□□□ 0.13
ERCC2P18074 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC15.84■□□□□ 0.13
ERCC2P18074 ELK1P1-201ENST00000485699 580 ntBASIC15.84■□□□□ 0.13
ERCC2P18074 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
ERCC2P18074 AL359711.2-201ENST00000563105 872 ntBASIC15.84■□□□□ 0.13
ERCC2P18074 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
ERCC2P18074 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC15.84■□□□□ 0.13
ERCC2P18074 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC15.84■□□□□ 0.13
ERCC2P18074 AC008494.3-201ENST00000606615 944 ntBASIC15.84■□□□□ 0.13
ERCC2P18074 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC15.84■□□□□ 0.13
ERCC2P18074 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.84■□□□□ 0.13
ERCC2P18074 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
ERCC2P18074 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
ERCC2P18074 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
ERCC2P18074 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
ERCC2P18074 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms