Protein–RNA interactions for Protein: P0DMS9

TMIGD3, Transmembrane domain-containing protein TMIGD3, humanhuman

Predicted RBP Predictions only

Length 266 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMIGD3P0DMS9 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TMIGD3P0DMS9 IGHV3-71-201ENST00000523324 359 ntBASIC14.02□□□□□ -0.17
TMIGD3P0DMS9 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.02□□□□□ -0.17
TMIGD3P0DMS9 NOP2-220ENST00000545915 630 ntTSL 2 BASIC14.02□□□□□ -0.17
TMIGD3P0DMS9 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC14.02□□□□□ -0.17
TMIGD3P0DMS9 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TMIGD3P0DMS9 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.02□□□□□ -0.17
TMIGD3P0DMS9 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.02□□□□□ -0.17
TMIGD3P0DMS9 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TMIGD3P0DMS9 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
TMIGD3P0DMS9 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TMIGD3P0DMS9 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TMIGD3P0DMS9 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
TMIGD3P0DMS9 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.02□□□□□ -0.17
TMIGD3P0DMS9 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.02□□□□□ -0.17
TMIGD3P0DMS9 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.02□□□□□ -0.17
TMIGD3P0DMS9 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.02□□□□□ -0.17
TMIGD3P0DMS9 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.02□□□□□ -0.17
TMIGD3P0DMS9 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TMIGD3P0DMS9 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.02□□□□□ -0.17
TMIGD3P0DMS9 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.02□□□□□ -0.17
TMIGD3P0DMS9 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
TMIGD3P0DMS9 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TMIGD3P0DMS9 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TMIGD3P0DMS9 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
TMIGD3P0DMS9 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
TMIGD3P0DMS9 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TMIGD3P0DMS9 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TMIGD3P0DMS9 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TMIGD3P0DMS9 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC14.01□□□□□ -0.17
TMIGD3P0DMS9 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TMIGD3P0DMS9 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TMIGD3P0DMS9 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
TMIGD3P0DMS9 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TMIGD3P0DMS9 AC091951.1-201ENST00000512854 2465 ntBASIC14.01□□□□□ -0.17
TMIGD3P0DMS9 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
TMIGD3P0DMS9 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TMIGD3P0DMS9 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.01□□□□□ -0.17
TMIGD3P0DMS9 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.01□□□□□ -0.17
TMIGD3P0DMS9 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TMIGD3P0DMS9 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TMIGD3P0DMS9 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.01□□□□□ -0.17
TMIGD3P0DMS9 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TMIGD3P0DMS9 AC136604.1-201ENST00000418535 575 ntBASIC14.01□□□□□ -0.17
TMIGD3P0DMS9 ARSEP1-201ENST00000420443 635 ntBASIC14.01□□□□□ -0.17
TMIGD3P0DMS9 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
TMIGD3P0DMS9 FAM86LP-201ENST00000478302 853 ntBASIC14.01□□□□□ -0.17
TMIGD3P0DMS9 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC14.01□□□□□ -0.17
TMIGD3P0DMS9 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC14.01□□□□□ -0.17
TMIGD3P0DMS9 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.01□□□□□ -0.17
TMIGD3P0DMS9 HILS1-202ENST00000545329 423 ntBASIC14.01□□□□□ -0.17
TMIGD3P0DMS9 HNRNPUP1-201ENST00000554987 333 ntBASIC14.01□□□□□ -0.17
TMIGD3P0DMS9 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC14.01□□□□□ -0.17
TMIGD3P0DMS9 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TMIGD3P0DMS9 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC14.01□□□□□ -0.17
TMIGD3P0DMS9 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC14.01□□□□□ -0.17
TMIGD3P0DMS9 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
TMIGD3P0DMS9 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
TMIGD3P0DMS9 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC14.01□□□□□ -0.17
TMIGD3P0DMS9 AL391069.4-201ENST00000609583 481 ntBASIC14.01□□□□□ -0.17
TMIGD3P0DMS9 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
TMIGD3P0DMS9 AL162274.1-201ENST00000617191 1098 ntBASIC14.01□□□□□ -0.17
TMIGD3P0DMS9 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.01□□□□□ -0.17
TMIGD3P0DMS9 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TMIGD3P0DMS9 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TMIGD3P0DMS9 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TMIGD3P0DMS9 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.01□□□□□ -0.17
TMIGD3P0DMS9 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
TMIGD3P0DMS9 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TMIGD3P0DMS9 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TMIGD3P0DMS9 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.01□□□□□ -0.17
TMIGD3P0DMS9 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TMIGD3P0DMS9 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.01□□□□□ -0.17
TMIGD3P0DMS9 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TMIGD3P0DMS9 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
TMIGD3P0DMS9 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.01□□□□□ -0.17
TMIGD3P0DMS9 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TMIGD3P0DMS9 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TMIGD3P0DMS9 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TMIGD3P0DMS9 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14□□□□□ -0.17
TMIGD3P0DMS9 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TMIGD3P0DMS9 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
TMIGD3P0DMS9 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14□□□□□ -0.17
TMIGD3P0DMS9 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14□□□□□ -0.17
TMIGD3P0DMS9 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC14□□□□□ -0.17
TMIGD3P0DMS9 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14□□□□□ -0.17
TMIGD3P0DMS9 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TMIGD3P0DMS9 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
TMIGD3P0DMS9 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14□□□□□ -0.17
TMIGD3P0DMS9 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TMIGD3P0DMS9 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14□□□□□ -0.17
TMIGD3P0DMS9 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TMIGD3P0DMS9 AC087481.3-201ENST00000602886 1894 ntBASIC14□□□□□ -0.17
TMIGD3P0DMS9 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14□□□□□ -0.17
TMIGD3P0DMS9 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
TMIGD3P0DMS9 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14□□□□□ -0.17
TMIGD3P0DMS9 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TMIGD3P0DMS9 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC14□□□□□ -0.17
TMIGD3P0DMS9 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
TMIGD3P0DMS9 MXI1-205ENST00000393134 889 ntTSL 2 BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms