Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
BEST1O76090 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
BEST1O76090 EIF3FP3-201ENST00000434851 1086 ntBASIC16.11■□□□□ 0.17
BEST1O76090 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
BEST1O76090 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
BEST1O76090 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC16.11■□□□□ 0.17
BEST1O76090 AC007551.1-201ENST00000457394 519 ntBASIC16.11■□□□□ 0.17
BEST1O76090 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC16.11■□□□□ 0.17
BEST1O76090 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
BEST1O76090 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
BEST1O76090 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
BEST1O76090 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC16.11■□□□□ 0.17
BEST1O76090 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
BEST1O76090 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.11■□□□□ 0.17
BEST1O76090 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
BEST1O76090 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
BEST1O76090 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
BEST1O76090 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC16.11■□□□□ 0.17
BEST1O76090 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
BEST1O76090 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
BEST1O76090 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.11■□□□□ 0.17
BEST1O76090 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
BEST1O76090 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
BEST1O76090 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
BEST1O76090 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
BEST1O76090 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
BEST1O76090 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC16.1■□□□□ 0.17
BEST1O76090 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
BEST1O76090 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
BEST1O76090 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.1■□□□□ 0.17
BEST1O76090 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
BEST1O76090 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
BEST1O76090 AC126177.1-201ENST00000547829 2218 ntBASIC16.1■□□□□ 0.17
BEST1O76090 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.1■□□□□ 0.17
BEST1O76090 MROH4P-201ENST00000431302 1578 ntBASIC16.1■□□□□ 0.17
BEST1O76090 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
BEST1O76090 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
BEST1O76090 AC144831.1-201ENST00000573312 2656 ntBASIC16.1■□□□□ 0.17
BEST1O76090 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
BEST1O76090 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
BEST1O76090 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
BEST1O76090 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
BEST1O76090 LSM5-207ENST00000410044 687 ntTSL 3 BASIC16.1■□□□□ 0.17
BEST1O76090 USB1-202ENST00000423271 1217 ntTSL 2 BASIC16.1■□□□□ 0.17
BEST1O76090 KRT43P-201ENST00000434019 910 ntBASIC16.1■□□□□ 0.17
BEST1O76090 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC16.1■□□□□ 0.17
BEST1O76090 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
BEST1O76090 AC234783.1-201ENST00000441761 496 ntBASIC16.1■□□□□ 0.17
BEST1O76090 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC16.1■□□□□ 0.17
BEST1O76090 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC16.1■□□□□ 0.17
BEST1O76090 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC16.1■□□□□ 0.17
BEST1O76090 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC16.1■□□□□ 0.17
BEST1O76090 AC017083.2-201ENST00000608069 979 ntBASIC16.1■□□□□ 0.17
BEST1O76090 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
BEST1O76090 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
BEST1O76090 PES1-204ENST00000402284 2144 ntTSL 5 BASIC16.1■□□□□ 0.17
BEST1O76090 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
BEST1O76090 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
BEST1O76090 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
BEST1O76090 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
BEST1O76090 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
BEST1O76090 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
BEST1O76090 AC006486.2-201ENST00000624246 2199 ntBASIC16.1■□□□□ 0.17
BEST1O76090 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
BEST1O76090 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
BEST1O76090 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
BEST1O76090 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.1■□□□□ 0.17
BEST1O76090 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.1■□□□□ 0.17
BEST1O76090 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
BEST1O76090 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
BEST1O76090 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
BEST1O76090 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
BEST1O76090 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.09■□□□□ 0.17
BEST1O76090 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC16.09■□□□□ 0.17
BEST1O76090 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
BEST1O76090 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
BEST1O76090 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
BEST1O76090 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.09■□□□□ 0.17
BEST1O76090 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
BEST1O76090 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
BEST1O76090 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.09■□□□□ 0.17
BEST1O76090 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
BEST1O76090 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
BEST1O76090 ZBTB12BP-201ENST00000314232 1122 ntBASIC16.09■□□□□ 0.17
BEST1O76090 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
BEST1O76090 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC16.09■□□□□ 0.17
BEST1O76090 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
BEST1O76090 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
BEST1O76090 MIR658-201ENST00000385210 100 ntBASIC16.09■□□□□ 0.17
BEST1O76090 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
BEST1O76090 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC16.09■□□□□ 0.17
BEST1O76090 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC16.09■□□□□ 0.17
BEST1O76090 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
BEST1O76090 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC16.09■□□□□ 0.17
BEST1O76090 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC16.09■□□□□ 0.17
BEST1O76090 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC16.09■□□□□ 0.17
BEST1O76090 AC025279.2-201ENST00000569730 653 ntBASIC16.09■□□□□ 0.17
BEST1O76090 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC16.09■□□□□ 0.17
BEST1O76090 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC16.09■□□□□ 0.17
BEST1O76090 AL008721.1-201ENST00000609964 604 ntBASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms