Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
CDC42SE2Q9NRR3 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
CDC42SE2Q9NRR3 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
CDC42SE2Q9NRR3 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
CDC42SE2Q9NRR3 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC10.67□□□□□ -0.7
CDC42SE2Q9NRR3 RPS19-201ENST00000221975 500 ntTSL 3 BASIC10.67□□□□□ -0.7
CDC42SE2Q9NRR3 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC10.67□□□□□ -0.7
CDC42SE2Q9NRR3 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
CDC42SE2Q9NRR3 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
CDC42SE2Q9NRR3 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
CDC42SE2Q9NRR3 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
CDC42SE2Q9NRR3 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
CDC42SE2Q9NRR3 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC10.67□□□□□ -0.7
CDC42SE2Q9NRR3 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
CDC42SE2Q9NRR3 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC10.67□□□□□ -0.7
CDC42SE2Q9NRR3 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC10.67□□□□□ -0.7
CDC42SE2Q9NRR3 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
CDC42SE2Q9NRR3 TARDBPP1-201ENST00000442013 1203 ntBASIC10.67□□□□□ -0.7
CDC42SE2Q9NRR3 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC10.67□□□□□ -0.7
CDC42SE2Q9NRR3 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC10.67□□□□□ -0.7
CDC42SE2Q9NRR3 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC10.67□□□□□ -0.7
CDC42SE2Q9NRR3 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC10.67□□□□□ -0.7
CDC42SE2Q9NRR3 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC10.67□□□□□ -0.7
CDC42SE2Q9NRR3 SLC25A1P1-201ENST00000528351 927 ntBASIC10.67□□□□□ -0.7
CDC42SE2Q9NRR3 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC10.67□□□□□ -0.7
CDC42SE2Q9NRR3 AC040169.1-201ENST00000565382 521 ntBASIC10.67□□□□□ -0.7
CDC42SE2Q9NRR3 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC10.67□□□□□ -0.7
CDC42SE2Q9NRR3 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC10.67□□□□□ -0.7
CDC42SE2Q9NRR3 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC10.67□□□□□ -0.7
CDC42SE2Q9NRR3 AC018529.1-201ENST00000613063 361 ntBASIC10.67□□□□□ -0.7
CDC42SE2Q9NRR3 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC10.67□□□□□ -0.7
CDC42SE2Q9NRR3 C20orf181-201ENST00000623918 480 ntBASIC10.67□□□□□ -0.7
CDC42SE2Q9NRR3 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
CDC42SE2Q9NRR3 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
CDC42SE2Q9NRR3 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
CDC42SE2Q9NRR3 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC10.67□□□□□ -0.7
CDC42SE2Q9NRR3 AC139749.1-202ENST00000617529 3139 ntBASIC10.67□□□□□ -0.7
CDC42SE2Q9NRR3 USP28-214ENST00000545540 3431 ntTSL 2 BASIC10.67□□□□□ -0.7
CDC42SE2Q9NRR3 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
CDC42SE2Q9NRR3 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
CDC42SE2Q9NRR3 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
CDC42SE2Q9NRR3 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
CDC42SE2Q9NRR3 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
CDC42SE2Q9NRR3 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
CDC42SE2Q9NRR3 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
CDC42SE2Q9NRR3 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
CDC42SE2Q9NRR3 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
CDC42SE2Q9NRR3 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
CDC42SE2Q9NRR3 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
CDC42SE2Q9NRR3 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
CDC42SE2Q9NRR3 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC10.67□□□□□ -0.7
CDC42SE2Q9NRR3 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
CDC42SE2Q9NRR3 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC10.67□□□□□ -0.7
CDC42SE2Q9NRR3 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
CDC42SE2Q9NRR3 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
CDC42SE2Q9NRR3 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
CDC42SE2Q9NRR3 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
CDC42SE2Q9NRR3 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC10.67□□□□□ -0.7
CDC42SE2Q9NRR3 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
CDC42SE2Q9NRR3 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
CDC42SE2Q9NRR3 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC10.66□□□□□ -0.7
CDC42SE2Q9NRR3 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
CDC42SE2Q9NRR3 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
CDC42SE2Q9NRR3 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
CDC42SE2Q9NRR3 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
CDC42SE2Q9NRR3 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC10.66□□□□□ -0.7
CDC42SE2Q9NRR3 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
CDC42SE2Q9NRR3 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
CDC42SE2Q9NRR3 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
CDC42SE2Q9NRR3 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC10.66□□□□□ -0.7
CDC42SE2Q9NRR3 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC10.66□□□□□ -0.7
CDC42SE2Q9NRR3 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
CDC42SE2Q9NRR3 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
CDC42SE2Q9NRR3 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
CDC42SE2Q9NRR3 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC10.66□□□□□ -0.7
CDC42SE2Q9NRR3 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
CDC42SE2Q9NRR3 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC10.66□□□□□ -0.7
CDC42SE2Q9NRR3 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
CDC42SE2Q9NRR3 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC10.66□□□□□ -0.7
CDC42SE2Q9NRR3 MKNK2P1-201ENST00000437526 628 ntBASIC10.66□□□□□ -0.7
CDC42SE2Q9NRR3 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC10.66□□□□□ -0.7
CDC42SE2Q9NRR3 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC10.66□□□□□ -0.7
CDC42SE2Q9NRR3 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC10.66□□□□□ -0.7
CDC42SE2Q9NRR3 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
CDC42SE2Q9NRR3 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC10.66□□□□□ -0.7
CDC42SE2Q9NRR3 PTK7-212ENST00000476760 902 ntTSL 2 BASIC10.66□□□□□ -0.7
CDC42SE2Q9NRR3 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC10.66□□□□□ -0.7
CDC42SE2Q9NRR3 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC10.66□□□□□ -0.7
CDC42SE2Q9NRR3 ALG1L8P-201ENST00000533887 760 ntBASIC10.66□□□□□ -0.7
CDC42SE2Q9NRR3 BANF1P1-201ENST00000553684 263 ntBASIC10.66□□□□□ -0.7
CDC42SE2Q9NRR3 LITAF-210ENST00000571976 548 ntTSL 2 BASIC10.66□□□□□ -0.7
CDC42SE2Q9NRR3 LITAF-214ENST00000574703 486 ntTSL 2 BASIC10.66□□□□□ -0.7
CDC42SE2Q9NRR3 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC10.66□□□□□ -0.7
CDC42SE2Q9NRR3 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
CDC42SE2Q9NRR3 MPI-203ENST00000535694 1523 ntTSL 2 BASIC10.66□□□□□ -0.7
CDC42SE2Q9NRR3 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
CDC42SE2Q9NRR3 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
CDC42SE2Q9NRR3 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC10.66□□□□□ -0.7
CDC42SE2Q9NRR3 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC10.66□□□□□ -0.7
CDC42SE2Q9NRR3 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC10.66□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms