Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HMGCS2P54868 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HMGCS2P54868 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HMGCS2P54868 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
HMGCS2P54868 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.63■□□□□ 0.41
HMGCS2P54868 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
HMGCS2P54868 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HMGCS2P54868 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
HMGCS2P54868 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
HMGCS2P54868 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.63■□□□□ 0.41
HMGCS2P54868 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC17.63■□□□□ 0.41
HMGCS2P54868 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
HMGCS2P54868 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HMGCS2P54868 CRCP-204ENST00000398684 492 ntTSL 2 BASIC17.63■□□□□ 0.41
HMGCS2P54868 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC17.63■□□□□ 0.41
HMGCS2P54868 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
HMGCS2P54868 MESTP3-201ENST00000503460 968 ntBASIC17.63■□□□□ 0.41
HMGCS2P54868 AC005740.2-201ENST00000511085 419 ntBASIC17.63■□□□□ 0.41
HMGCS2P54868 AC245884.6-201ENST00000515672 1067 ntBASIC17.63■□□□□ 0.41
HMGCS2P54868 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC17.63■□□□□ 0.41
HMGCS2P54868 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC17.63■□□□□ 0.41
HMGCS2P54868 MIR4683-201ENST00000579659 81 ntBASIC17.63■□□□□ 0.41
HMGCS2P54868 AC022748.3-201ENST00000621828 275 ntBASIC17.63■□□□□ 0.41
HMGCS2P54868 CU633904.3-201ENST00000624042 1029 ntBASIC17.63■□□□□ 0.41
HMGCS2P54868 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC17.63■□□□□ 0.41
HMGCS2P54868 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HMGCS2P54868 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
HMGCS2P54868 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
HMGCS2P54868 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
HMGCS2P54868 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
HMGCS2P54868 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
HMGCS2P54868 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
HMGCS2P54868 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
HMGCS2P54868 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HMGCS2P54868 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
HMGCS2P54868 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC17.63■□□□□ 0.41
HMGCS2P54868 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HMGCS2P54868 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HMGCS2P54868 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HMGCS2P54868 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
HMGCS2P54868 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HMGCS2P54868 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
HMGCS2P54868 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
HMGCS2P54868 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
HMGCS2P54868 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HMGCS2P54868 CYP2T1P-202ENST00000641596 2535 ntBASIC17.62■□□□□ 0.41
HMGCS2P54868 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HMGCS2P54868 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HMGCS2P54868 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HMGCS2P54868 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC17.62■□□□□ 0.41
HMGCS2P54868 MST1L-201ENST00000442552 2185 ntBASIC17.62■□□□□ 0.41
HMGCS2P54868 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC17.62■□□□□ 0.41
HMGCS2P54868 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.62■□□□□ 0.41
HMGCS2P54868 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HMGCS2P54868 AC104457.1-201ENST00000401024 814 ntBASIC17.62■□□□□ 0.41
HMGCS2P54868 RPL5P21-201ENST00000404620 815 ntBASIC17.62■□□□□ 0.41
HMGCS2P54868 RN7SL11P-201ENST00000471305 293 ntBASIC17.62■□□□□ 0.41
HMGCS2P54868 AC026434.2-201ENST00000506094 1078 ntBASIC17.62■□□□□ 0.41
HMGCS2P54868 AC022217.1-201ENST00000521069 738 ntBASIC17.62■□□□□ 0.41
HMGCS2P54868 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC17.62■□□□□ 0.41
HMGCS2P54868 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC17.62■□□□□ 0.41
HMGCS2P54868 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC17.62■□□□□ 0.41
HMGCS2P54868 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC17.62■□□□□ 0.41
HMGCS2P54868 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC17.62■□□□□ 0.41
HMGCS2P54868 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC17.62■□□□□ 0.41
HMGCS2P54868 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC17.62■□□□□ 0.41
HMGCS2P54868 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
HMGCS2P54868 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HMGCS2P54868 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
HMGCS2P54868 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC17.62■□□□□ 0.41
HMGCS2P54868 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HMGCS2P54868 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HMGCS2P54868 FKBP4P6-201ENST00000457486 1332 ntBASIC17.62■□□□□ 0.41
HMGCS2P54868 TUBBP5-203ENST00000508529 1334 ntBASIC17.62■□□□□ 0.41
HMGCS2P54868 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HMGCS2P54868 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
HMGCS2P54868 KRT8P29-201ENST00000420409 1371 ntBASIC17.62■□□□□ 0.41
HMGCS2P54868 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
HMGCS2P54868 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HMGCS2P54868 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HMGCS2P54868 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HMGCS2P54868 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HMGCS2P54868 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HMGCS2P54868 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
HMGCS2P54868 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
HMGCS2P54868 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
HMGCS2P54868 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC17.61■□□□□ 0.41
HMGCS2P54868 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC17.61■□□□□ 0.41
HMGCS2P54868 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC17.61■□□□□ 0.41
HMGCS2P54868 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HMGCS2P54868 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HMGCS2P54868 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HMGCS2P54868 AC091046.1-201ENST00000331871 207 ntBASIC17.61■□□□□ 0.41
HMGCS2P54868 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HMGCS2P54868 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HMGCS2P54868 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HMGCS2P54868 GGCT-203ENST00000409144 836 ntTSL 2 BASIC17.61■□□□□ 0.41
HMGCS2P54868 RNMTL1P1-201ENST00000454103 560 ntBASIC17.61■□□□□ 0.41
HMGCS2P54868 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HMGCS2P54868 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms