Protein–RNA interactions for Protein: P19474

TRIM21, E3 ubiquitin-protein ligase TRIM21, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM21P19474 SPIB-207ENST00000597855 564 ntTSL 4 BASIC17.11■□□□□ 0.33
TRIM21P19474 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM21P19474 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM21P19474 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM21P19474 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
TRIM21P19474 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC17.11■□□□□ 0.33
TRIM21P19474 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM21P19474 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM21P19474 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC17.11■□□□□ 0.33
TRIM21P19474 AL607033.1-201ENST00000623900 1599 ntBASIC17.11■□□□□ 0.33
TRIM21P19474 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM21P19474 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM21P19474 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TRIM21P19474 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC17.1■□□□□ 0.33
TRIM21P19474 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC17.1■□□□□ 0.33
TRIM21P19474 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM21P19474 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TRIM21P19474 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
TRIM21P19474 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM21P19474 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM21P19474 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM21P19474 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM21P19474 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM21P19474 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM21P19474 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM21P19474 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM21P19474 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
TRIM21P19474 FO393414.2-201ENST00000405153 598 ntBASIC17.1■□□□□ 0.33
TRIM21P19474 AZGP1P1-201ENST00000411909 902 ntBASIC17.1■□□□□ 0.33
TRIM21P19474 AC136604.1-201ENST00000418535 575 ntBASIC17.1■□□□□ 0.33
TRIM21P19474 TREML5P-201ENST00000421694 576 ntBASIC17.1■□□□□ 0.33
TRIM21P19474 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC17.1■□□□□ 0.33
TRIM21P19474 AC241585.1-201ENST00000433527 519 ntBASIC17.1■□□□□ 0.33
TRIM21P19474 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC17.1■□□□□ 0.33
TRIM21P19474 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM21P19474 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC17.1■□□□□ 0.33
TRIM21P19474 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM21P19474 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
TRIM21P19474 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM21P19474 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM21P19474 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM21P19474 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC17.1■□□□□ 0.33
TRIM21P19474 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM21P19474 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM21P19474 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM21P19474 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM21P19474 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM21P19474 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC17.1■□□□□ 0.33
TRIM21P19474 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM21P19474 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC17.1■□□□□ 0.33
TRIM21P19474 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM21P19474 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM21P19474 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM21P19474 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM21P19474 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC17.1■□□□□ 0.33
TRIM21P19474 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM21P19474 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC17.09■□□□□ 0.33
TRIM21P19474 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC17.09■□□□□ 0.33
TRIM21P19474 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM21P19474 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM21P19474 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC17.09■□□□□ 0.33
TRIM21P19474 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC17.09■□□□□ 0.33
TRIM21P19474 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
TRIM21P19474 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC17.09■□□□□ 0.33
TRIM21P19474 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC17.09■□□□□ 0.33
TRIM21P19474 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
TRIM21P19474 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC17.09■□□□□ 0.33
TRIM21P19474 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM21P19474 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC17.09■□□□□ 0.33
TRIM21P19474 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC17.09■□□□□ 0.33
TRIM21P19474 SPDYE17-201ENST00000412399 783 ntBASIC17.09■□□□□ 0.33
TRIM21P19474 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC17.09■□□□□ 0.33
TRIM21P19474 AC055876.3-201ENST00000431496 288 ntBASIC17.09■□□□□ 0.33
TRIM21P19474 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC17.09■□□□□ 0.33
TRIM21P19474 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC17.09■□□□□ 0.33
TRIM21P19474 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM21P19474 AC093214.1-201ENST00000511688 1107 ntBASIC17.09■□□□□ 0.33
TRIM21P19474 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
TRIM21P19474 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC17.09■□□□□ 0.33
TRIM21P19474 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM21P19474 AC011467.4-201ENST00000594891 528 ntBASIC17.09■□□□□ 0.33
TRIM21P19474 AC138649.4-201ENST00000612222 287 ntBASIC17.09■□□□□ 0.33
TRIM21P19474 KRT8P12-202ENST00000472924 1397 ntBASIC17.09■□□□□ 0.33
TRIM21P19474 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM21P19474 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM21P19474 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC17.09■□□□□ 0.33
TRIM21P19474 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
TRIM21P19474 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM21P19474 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM21P19474 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
TRIM21P19474 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM21P19474 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM21P19474 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC17.09■□□□□ 0.33
TRIM21P19474 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM21P19474 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC17.09■□□□□ 0.33
TRIM21P19474 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
TRIM21P19474 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM21P19474 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM21P19474 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
TRIM21P19474 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms