Protein–RNA interactions for Protein: Q9BVG3

TRIM62, E3 ubiquitin-protein ligase TRIM62, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM62Q9BVG3 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM62Q9BVG3 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC16.06■□□□□ 0.16
TRIM62Q9BVG3 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC16.06■□□□□ 0.16
TRIM62Q9BVG3 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.06■□□□□ 0.16
TRIM62Q9BVG3 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.06■□□□□ 0.16
TRIM62Q9BVG3 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM62Q9BVG3 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM62Q9BVG3 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
TRIM62Q9BVG3 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM62Q9BVG3 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM62Q9BVG3 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM62Q9BVG3 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TRIM62Q9BVG3 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC16.06■□□□□ 0.16
TRIM62Q9BVG3 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM62Q9BVG3 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TRIM62Q9BVG3 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
TRIM62Q9BVG3 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM62Q9BVG3 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM62Q9BVG3 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
TRIM62Q9BVG3 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM62Q9BVG3 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC16.06■□□□□ 0.16
TRIM62Q9BVG3 B9D1-203ENST00000395615 805 ntTSL 3 BASIC16.06■□□□□ 0.16
TRIM62Q9BVG3 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC16.06■□□□□ 0.16
TRIM62Q9BVG3 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM62Q9BVG3 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC16.06■□□□□ 0.16
TRIM62Q9BVG3 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM62Q9BVG3 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
TRIM62Q9BVG3 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM62Q9BVG3 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC16.06■□□□□ 0.16
TRIM62Q9BVG3 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM62Q9BVG3 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM62Q9BVG3 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
TRIM62Q9BVG3 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM62Q9BVG3 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM62Q9BVG3 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM62Q9BVG3 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM62Q9BVG3 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TRIM62Q9BVG3 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM62Q9BVG3 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM62Q9BVG3 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC16.06■□□□□ 0.16
TRIM62Q9BVG3 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.06■□□□□ 0.16
TRIM62Q9BVG3 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.05■□□□□ 0.16
TRIM62Q9BVG3 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM62Q9BVG3 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
TRIM62Q9BVG3 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.05■□□□□ 0.16
TRIM62Q9BVG3 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM62Q9BVG3 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM62Q9BVG3 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.05■□□□□ 0.16
TRIM62Q9BVG3 MROH4P-201ENST00000431302 1578 ntBASIC16.05■□□□□ 0.16
TRIM62Q9BVG3 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM62Q9BVG3 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM62Q9BVG3 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM62Q9BVG3 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM62Q9BVG3 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM62Q9BVG3 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
TRIM62Q9BVG3 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM62Q9BVG3 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
TRIM62Q9BVG3 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC16.05■□□□□ 0.16
TRIM62Q9BVG3 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC16.05■□□□□ 0.16
TRIM62Q9BVG3 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC16.05■□□□□ 0.16
TRIM62Q9BVG3 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM62Q9BVG3 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM62Q9BVG3 AC010319.3-201ENST00000597028 470 ntBASIC16.05■□□□□ 0.16
TRIM62Q9BVG3 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC16.05■□□□□ 0.16
TRIM62Q9BVG3 AC005252.2-201ENST00000624630 1141 ntBASIC16.05■□□□□ 0.16
TRIM62Q9BVG3 SERF2-217ENST00000630046 862 ntTSL 5 BASIC16.05■□□□□ 0.16
TRIM62Q9BVG3 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
TRIM62Q9BVG3 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM62Q9BVG3 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM62Q9BVG3 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.05■□□□□ 0.16
TRIM62Q9BVG3 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM62Q9BVG3 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM62Q9BVG3 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM62Q9BVG3 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC16.04■□□□□ 0.16
TRIM62Q9BVG3 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
TRIM62Q9BVG3 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM62Q9BVG3 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM62Q9BVG3 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM62Q9BVG3 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC16.04■□□□□ 0.16
TRIM62Q9BVG3 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC16.04■□□□□ 0.16
TRIM62Q9BVG3 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM62Q9BVG3 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC16.04■□□□□ 0.16
TRIM62Q9BVG3 RPS15-201ENST00000233609 534 ntTSL 2 BASIC16.04■□□□□ 0.16
TRIM62Q9BVG3 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC16.04■□□□□ 0.16
TRIM62Q9BVG3 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM62Q9BVG3 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC16.04■□□□□ 0.16
TRIM62Q9BVG3 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
TRIM62Q9BVG3 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC16.04■□□□□ 0.16
TRIM62Q9BVG3 TTTY23B-201ENST00000442790 549 ntBASIC16.04■□□□□ 0.16
TRIM62Q9BVG3 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC16.04■□□□□ 0.16
TRIM62Q9BVG3 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC16.04■□□□□ 0.16
TRIM62Q9BVG3 GAPDHP21-201ENST00000450301 1010 ntBASIC16.04■□□□□ 0.16
TRIM62Q9BVG3 INE1-201ENST00000456273 945 ntBASIC16.04■□□□□ 0.16
TRIM62Q9BVG3 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM62Q9BVG3 RN7SL837P-201ENST00000463010 287 ntBASIC16.04■□□□□ 0.16
TRIM62Q9BVG3 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC16.04■□□□□ 0.16
TRIM62Q9BVG3 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
TRIM62Q9BVG3 AC022137.2-201ENST00000503482 481 ntBASIC16.04■□□□□ 0.16
TRIM62Q9BVG3 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
TRIM62Q9BVG3 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms