Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DDX11Q96FC9 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC18.4■□□□□ 0.54
DDX11Q96FC9 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
DDX11Q96FC9 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
DDX11Q96FC9 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
DDX11Q96FC9 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
DDX11Q96FC9 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DDX11Q96FC9 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC18.4■□□□□ 0.54
DDX11Q96FC9 PTK7-212ENST00000476760 902 ntTSL 2 BASIC18.4■□□□□ 0.54
DDX11Q96FC9 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC18.4■□□□□ 0.54
DDX11Q96FC9 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC18.4■□□□□ 0.54
DDX11Q96FC9 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
DDX11Q96FC9 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
DDX11Q96FC9 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
DDX11Q96FC9 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC18.4■□□□□ 0.54
DDX11Q96FC9 IFT20-216ENST00000588477 774 ntTSL 5 BASIC18.4■□□□□ 0.54
DDX11Q96FC9 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
DDX11Q96FC9 AC099568.2-201ENST00000609194 695 ntBASIC18.4■□□□□ 0.54
DDX11Q96FC9 AC074044.1-201ENST00000609673 707 ntBASIC18.4■□□□□ 0.54
DDX11Q96FC9 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
DDX11Q96FC9 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
DDX11Q96FC9 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
DDX11Q96FC9 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DDX11Q96FC9 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
DDX11Q96FC9 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DDX11Q96FC9 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC18.4■□□□□ 0.54
DDX11Q96FC9 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
DDX11Q96FC9 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
DDX11Q96FC9 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
DDX11Q96FC9 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
DDX11Q96FC9 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
DDX11Q96FC9 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC18.39■□□□□ 0.54
DDX11Q96FC9 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
DDX11Q96FC9 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
DDX11Q96FC9 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.54
DDX11Q96FC9 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
DDX11Q96FC9 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
DDX11Q96FC9 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
DDX11Q96FC9 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC18.39■□□□□ 0.53
DDX11Q96FC9 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
DDX11Q96FC9 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
DDX11Q96FC9 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
DDX11Q96FC9 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
DDX11Q96FC9 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
DDX11Q96FC9 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
DDX11Q96FC9 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
DDX11Q96FC9 PGF-202ENST00000405431 666 ntTSL 5 BASIC18.39■□□□□ 0.53
DDX11Q96FC9 AC136604.1-201ENST00000418535 575 ntBASIC18.39■□□□□ 0.53
DDX11Q96FC9 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC18.39■□□□□ 0.53
DDX11Q96FC9 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC18.39■□□□□ 0.53
DDX11Q96FC9 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
DDX11Q96FC9 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC18.39■□□□□ 0.53
DDX11Q96FC9 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
DDX11Q96FC9 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
DDX11Q96FC9 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC18.39■□□□□ 0.53
DDX11Q96FC9 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC18.39■□□□□ 0.53
DDX11Q96FC9 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
DDX11Q96FC9 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
DDX11Q96FC9 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
DDX11Q96FC9 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
DDX11Q96FC9 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
DDX11Q96FC9 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
DDX11Q96FC9 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
DDX11Q96FC9 STK33-217ENST00000534493 1895 ntTSL 2 BASIC18.39■□□□□ 0.53
DDX11Q96FC9 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
DDX11Q96FC9 MECR-202ENST00000373791 2416 ntTSL 2 BASIC18.39■□□□□ 0.53
DDX11Q96FC9 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
DDX11Q96FC9 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
DDX11Q96FC9 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC18.38■□□□□ 0.53
DDX11Q96FC9 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC18.38■□□□□ 0.53
DDX11Q96FC9 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
DDX11Q96FC9 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
DDX11Q96FC9 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC18.38■□□□□ 0.53
DDX11Q96FC9 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
DDX11Q96FC9 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
DDX11Q96FC9 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
DDX11Q96FC9 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
DDX11Q96FC9 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC18.38■□□□□ 0.53
DDX11Q96FC9 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC18.38■□□□□ 0.53
DDX11Q96FC9 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC18.38■□□□□ 0.53
DDX11Q96FC9 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
DDX11Q96FC9 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
DDX11Q96FC9 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
DDX11Q96FC9 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
DDX11Q96FC9 MXI1-205ENST00000393134 889 ntTSL 2 BASIC18.38■□□□□ 0.53
DDX11Q96FC9 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
DDX11Q96FC9 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC18.38■□□□□ 0.53
DDX11Q96FC9 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC18.38■□□□□ 0.53
DDX11Q96FC9 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC18.38■□□□□ 0.53
DDX11Q96FC9 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC18.38■□□□□ 0.53
DDX11Q96FC9 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
DDX11Q96FC9 FADS2-205ENST00000517839 469 ntTSL 3 BASIC18.38■□□□□ 0.53
DDX11Q96FC9 CTBP2P3-201ENST00000585629 1255 ntBASIC18.38■□□□□ 0.53
DDX11Q96FC9 AC025048.3-201ENST00000590609 569 ntBASIC18.38■□□□□ 0.53
DDX11Q96FC9 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC18.38■□□□□ 0.53
DDX11Q96FC9 AC093726.1-201ENST00000608064 963 ntBASIC18.38■□□□□ 0.53
DDX11Q96FC9 AL162274.1-201ENST00000617191 1098 ntBASIC18.38■□□□□ 0.53
DDX11Q96FC9 AC005702.4-201ENST00000618393 416 ntBASIC18.38■□□□□ 0.53
DDX11Q96FC9 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC18.38■□□□□ 0.53
DDX11Q96FC9 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms