Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
UBR1Q8IWV7 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC21.28■■□□□ 1
UBR1Q8IWV7 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
UBR1Q8IWV7 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.28■■□□□ 1
UBR1Q8IWV7 BANF1P3-201ENST00000412556 261 ntBASIC21.28■■□□□ 1
UBR1Q8IWV7 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
UBR1Q8IWV7 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC21.28■■□□□ 1
UBR1Q8IWV7 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC21.28■■□□□ 1
UBR1Q8IWV7 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC21.28■■□□□ 1
UBR1Q8IWV7 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC21.28■■□□□ 1
UBR1Q8IWV7 AC012313.1-201ENST00000593393 3059 ntBASIC21.28■■□□□ 1
UBR1Q8IWV7 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC21.28■■□□□ 1
UBR1Q8IWV7 AC092127.1-201ENST00000567093 3455 ntBASIC21.28■■□□□ 1
UBR1Q8IWV7 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
UBR1Q8IWV7 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC21.28■■□□□ 1
UBR1Q8IWV7 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC21.28■■□□□ 1
UBR1Q8IWV7 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC21.28■■□□□ 1
UBR1Q8IWV7 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC21.27■■□□□ 1
UBR1Q8IWV7 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
UBR1Q8IWV7 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
UBR1Q8IWV7 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC21.27■■□□□ 1
UBR1Q8IWV7 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC21.27■■□□□ 1
UBR1Q8IWV7 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC21.27■■□□□ 1
UBR1Q8IWV7 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
UBR1Q8IWV7 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC21.27■■□□□ 1
UBR1Q8IWV7 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
UBR1Q8IWV7 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC21.27■■□□□ 1
UBR1Q8IWV7 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC21.27■■□□□ 1
UBR1Q8IWV7 BX088702.1-201ENST00000610784 235 ntBASIC21.27■■□□□ 1
UBR1Q8IWV7 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC21.27■■□□□ 1
UBR1Q8IWV7 AC244250.3-201ENST00000620749 366 ntBASIC21.27■■□□□ 1
UBR1Q8IWV7 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
UBR1Q8IWV7 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC21.27■■□□□ 1
UBR1Q8IWV7 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
UBR1Q8IWV7 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC21.27■■□□□ 1
UBR1Q8IWV7 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
UBR1Q8IWV7 LINC01815-202ENST00000641468 1409 ntBASIC21.27■■□□□ 1
UBR1Q8IWV7 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
UBR1Q8IWV7 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
UBR1Q8IWV7 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC21.27■□□□□ 0.99
UBR1Q8IWV7 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
UBR1Q8IWV7 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
UBR1Q8IWV7 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
UBR1Q8IWV7 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC21.26■□□□□ 0.99
UBR1Q8IWV7 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC21.26■□□□□ 0.99
UBR1Q8IWV7 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
UBR1Q8IWV7 LINC00634-202ENST00000505157 222 ntBASIC21.26■□□□□ 0.99
UBR1Q8IWV7 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC21.26■□□□□ 0.99
UBR1Q8IWV7 AC131206.1-201ENST00000538078 1211 ntBASIC21.26■□□□□ 0.99
UBR1Q8IWV7 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC21.26■□□□□ 0.99
UBR1Q8IWV7 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC21.26■□□□□ 0.99
UBR1Q8IWV7 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
UBR1Q8IWV7 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
UBR1Q8IWV7 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
UBR1Q8IWV7 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC21.26■□□□□ 0.99
UBR1Q8IWV7 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
UBR1Q8IWV7 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
UBR1Q8IWV7 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
UBR1Q8IWV7 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
UBR1Q8IWV7 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC21.26■□□□□ 0.99
UBR1Q8IWV7 AL590440.2-201ENST00000641973 1595 ntBASIC21.26■□□□□ 0.99
UBR1Q8IWV7 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC21.26■□□□□ 0.99
UBR1Q8IWV7 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
UBR1Q8IWV7 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
UBR1Q8IWV7 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC21.26■□□□□ 0.99
UBR1Q8IWV7 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC21.26■□□□□ 0.99
UBR1Q8IWV7 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC21.26■□□□□ 0.99
UBR1Q8IWV7 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
UBR1Q8IWV7 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
UBR1Q8IWV7 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
UBR1Q8IWV7 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC21.26■□□□□ 0.99
UBR1Q8IWV7 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
UBR1Q8IWV7 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
UBR1Q8IWV7 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
UBR1Q8IWV7 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
UBR1Q8IWV7 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
UBR1Q8IWV7 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
UBR1Q8IWV7 BLK-205ENST00000529894 2017 ntTSL 5 BASIC21.25■□□□□ 0.99
UBR1Q8IWV7 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
UBR1Q8IWV7 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
UBR1Q8IWV7 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
UBR1Q8IWV7 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC21.25■□□□□ 0.99
UBR1Q8IWV7 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
UBR1Q8IWV7 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
UBR1Q8IWV7 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
UBR1Q8IWV7 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
UBR1Q8IWV7 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
UBR1Q8IWV7 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
UBR1Q8IWV7 SERF2-206ENST00000409291 807 ntTSL 3 BASIC21.25■□□□□ 0.99
UBR1Q8IWV7 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC21.25■□□□□ 0.99
UBR1Q8IWV7 AL512306.1-201ENST00000432698 848 ntBASIC21.25■□□□□ 0.99
UBR1Q8IWV7 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
UBR1Q8IWV7 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC21.25■□□□□ 0.99
UBR1Q8IWV7 AC114947.1-202ENST00000514136 344 ntBASIC21.25■□□□□ 0.99
UBR1Q8IWV7 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC21.25■□□□□ 0.99
UBR1Q8IWV7 DNM1P51-201ENST00000558149 522 ntBASIC21.25■□□□□ 0.99
UBR1Q8IWV7 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC21.25■□□□□ 0.99
UBR1Q8IWV7 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
UBR1Q8IWV7 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
UBR1Q8IWV7 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms