Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rc3h1Q4VGL6 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rc3h1Q4VGL6 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rc3h1Q4VGL6 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Rc3h1Q4VGL6 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rc3h1Q4VGL6 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rc3h1Q4VGL6 Gm12380-201ENSMUST00000119012 544 ntBASIC14.31□□□□□ -0.12
Rc3h1Q4VGL6 Gm16481-201ENSMUST00000119074 1227 ntBASIC14.31□□□□□ -0.12
Rc3h1Q4VGL6 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rc3h1Q4VGL6 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC14.31□□□□□ -0.12
Rc3h1Q4VGL6 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rc3h1Q4VGL6 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rc3h1Q4VGL6 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rc3h1Q4VGL6 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC14.31□□□□□ -0.12
Rc3h1Q4VGL6 Gm19324-201ENSMUST00000213229 1169 ntBASIC14.31□□□□□ -0.12
Rc3h1Q4VGL6 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rc3h1Q4VGL6 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rc3h1Q4VGL6 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rc3h1Q4VGL6 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rc3h1Q4VGL6 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rc3h1Q4VGL6 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rc3h1Q4VGL6 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC14.31□□□□□ -0.12
Rc3h1Q4VGL6 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rc3h1Q4VGL6 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rc3h1Q4VGL6 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rc3h1Q4VGL6 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
Rc3h1Q4VGL6 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Rc3h1Q4VGL6 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rc3h1Q4VGL6 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rc3h1Q4VGL6 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
Rc3h1Q4VGL6 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rc3h1Q4VGL6 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rc3h1Q4VGL6 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rc3h1Q4VGL6 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rc3h1Q4VGL6 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rc3h1Q4VGL6 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rc3h1Q4VGL6 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rc3h1Q4VGL6 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rc3h1Q4VGL6 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC14.3□□□□□ -0.12
Rc3h1Q4VGL6 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rc3h1Q4VGL6 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rc3h1Q4VGL6 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC14.3□□□□□ -0.12
Rc3h1Q4VGL6 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC14.3□□□□□ -0.12
Rc3h1Q4VGL6 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rc3h1Q4VGL6 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Rc3h1Q4VGL6 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rc3h1Q4VGL6 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC14.3□□□□□ -0.12
Rc3h1Q4VGL6 CT025694.1-201ENSMUST00000226188 934 ntBASIC14.3□□□□□ -0.12
Rc3h1Q4VGL6 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC14.3□□□□□ -0.12
Rc3h1Q4VGL6 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Rc3h1Q4VGL6 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Rc3h1Q4VGL6 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rc3h1Q4VGL6 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rc3h1Q4VGL6 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rc3h1Q4VGL6 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Rc3h1Q4VGL6 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rc3h1Q4VGL6 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rc3h1Q4VGL6 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rc3h1Q4VGL6 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC14.3□□□□□ -0.12
Rc3h1Q4VGL6 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Rc3h1Q4VGL6 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rc3h1Q4VGL6 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rc3h1Q4VGL6 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Rc3h1Q4VGL6 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rc3h1Q4VGL6 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Rc3h1Q4VGL6 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rc3h1Q4VGL6 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rc3h1Q4VGL6 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rc3h1Q4VGL6 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rc3h1Q4VGL6 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC14.29□□□□□ -0.12
Rc3h1Q4VGL6 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rc3h1Q4VGL6 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rc3h1Q4VGL6 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rc3h1Q4VGL6 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rc3h1Q4VGL6 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rc3h1Q4VGL6 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rc3h1Q4VGL6 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rc3h1Q4VGL6 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC14.29□□□□□ -0.12
Rc3h1Q4VGL6 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rc3h1Q4VGL6 Gm5616-201ENSMUST00000165252 384 ntBASIC14.29□□□□□ -0.12
Rc3h1Q4VGL6 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rc3h1Q4VGL6 Gm8741-201ENSMUST00000174736 384 ntBASIC14.29□□□□□ -0.12
Rc3h1Q4VGL6 Mir6979-201ENSMUST00000183927 56 ntBASIC14.29□□□□□ -0.12
Rc3h1Q4VGL6 Gm36991-201ENSMUST00000191800 648 ntBASIC14.29□□□□□ -0.12
Rc3h1Q4VGL6 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rc3h1Q4VGL6 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC14.29□□□□□ -0.12
Rc3h1Q4VGL6 Olfr293-201ENSMUST00000081474 1011 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Rc3h1Q4VGL6 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rc3h1Q4VGL6 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rc3h1Q4VGL6 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rc3h1Q4VGL6 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rc3h1Q4VGL6 Gm45743-201ENSMUST00000212701 2795 ntBASIC14.29□□□□□ -0.12
Rc3h1Q4VGL6 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC14.29□□□□□ -0.12
Rc3h1Q4VGL6 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rc3h1Q4VGL6 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rc3h1Q4VGL6 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rc3h1Q4VGL6 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rc3h1Q4VGL6 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC14.29□□□□□ -0.12
Rc3h1Q4VGL6 AC123619.2-202ENSMUST00000225097 1568 ntBASIC14.29□□□□□ -0.12
Rc3h1Q4VGL6 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms