Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC15.36■□□□□ 0.05
HMGCLP35914 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HMGCLP35914 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HMGCLP35914 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.35■□□□□ 0.05
HMGCLP35914 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
HMGCLP35914 AP000845.1-201ENST00000581677 2131 ntBASIC15.35■□□□□ 0.05
HMGCLP35914 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HMGCLP35914 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
HMGCLP35914 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HMGCLP35914 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HMGCLP35914 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
HMGCLP35914 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
HMGCLP35914 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HMGCLP35914 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HMGCLP35914 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
HMGCLP35914 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
HMGCLP35914 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HMGCLP35914 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.35■□□□□ 0.05
HMGCLP35914 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
HMGCLP35914 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
HMGCLP35914 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HMGCLP35914 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC15.35■□□□□ 0.05
HMGCLP35914 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HMGCLP35914 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC15.35■□□□□ 0.05
HMGCLP35914 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC15.35■□□□□ 0.05
HMGCLP35914 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC15.35■□□□□ 0.05
HMGCLP35914 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC15.35■□□□□ 0.05
HMGCLP35914 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HMGCLP35914 PAM16-204ENST00000571941 674 ntTSL 3 BASIC15.35■□□□□ 0.05
HMGCLP35914 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC15.35■□□□□ 0.05
HMGCLP35914 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC15.35■□□□□ 0.05
HMGCLP35914 AL033527.5-201ENST00000641382 801 ntBASIC15.35■□□□□ 0.05
HMGCLP35914 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
HMGCLP35914 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
HMGCLP35914 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HMGCLP35914 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HMGCLP35914 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.35■□□□□ 0.05
HMGCLP35914 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HMGCLP35914 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.35■□□□□ 0.05
HMGCLP35914 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
HMGCLP35914 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.35■□□□□ 0.05
HMGCLP35914 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HMGCLP35914 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HMGCLP35914 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
HMGCLP35914 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HMGCLP35914 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.35■□□□□ 0.05
HMGCLP35914 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.35■□□□□ 0.05
HMGCLP35914 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
HMGCLP35914 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.34■□□□□ 0.05
HMGCLP35914 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HMGCLP35914 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC15.34■□□□□ 0.05
HMGCLP35914 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
HMGCLP35914 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
HMGCLP35914 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.34■□□□□ 0.05
HMGCLP35914 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.34■□□□□ 0.05
HMGCLP35914 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HMGCLP35914 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC15.34■□□□□ 0.05
HMGCLP35914 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.34■□□□□ 0.05
HMGCLP35914 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
HMGCLP35914 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC15.34■□□□□ 0.05
HMGCLP35914 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.34■□□□□ 0.05
HMGCLP35914 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC15.34■□□□□ 0.05
HMGCLP35914 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HMGCLP35914 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
HMGCLP35914 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC15.34■□□□□ 0.05
HMGCLP35914 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HMGCLP35914 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.34■□□□□ 0.05
HMGCLP35914 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
HMGCLP35914 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
HMGCLP35914 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HMGCLP35914 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
HMGCLP35914 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HMGCLP35914 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HMGCLP35914 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
HMGCLP35914 AP006294.1-201ENST00000415407 339 ntBASIC15.34■□□□□ 0.05
HMGCLP35914 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC15.34■□□□□ 0.05
HMGCLP35914 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC15.34■□□□□ 0.05
HMGCLP35914 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC15.34■□□□□ 0.05
HMGCLP35914 GLI4-203ENST00000517468 963 ntTSL 5 BASIC15.34■□□□□ 0.05
HMGCLP35914 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC15.34■□□□□ 0.05
HMGCLP35914 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC15.34■□□□□ 0.05
HMGCLP35914 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC15.34■□□□□ 0.05
HMGCLP35914 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC15.34■□□□□ 0.05
HMGCLP35914 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
HMGCLP35914 BX539320.1-201ENST00000623759 877 ntBASIC15.34■□□□□ 0.05
HMGCLP35914 SERF2-217ENST00000630046 862 ntTSL 5 BASIC15.34■□□□□ 0.05
HMGCLP35914 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC15.34■□□□□ 0.05
HMGCLP35914 PRSS30P-206ENST00000641773 873 ntBASIC15.34■□□□□ 0.05
HMGCLP35914 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HMGCLP35914 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HMGCLP35914 AL158070.2-201ENST00000623713 1621 ntBASIC15.34■□□□□ 0.05
HMGCLP35914 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HMGCLP35914 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
HMGCLP35914 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HMGCLP35914 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HMGCLP35914 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
HMGCLP35914 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HMGCLP35914 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HMGCLP35914 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.34■□□□□ 0.05
HMGCLP35914 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms