Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
VCANP13611 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
VCANP13611 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
VCANP13611 STK26-204ENST00000481105 1835 ntTSL 2 BASIC15.6■□□□□ 0.09
VCANP13611 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
VCANP13611 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
VCANP13611 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC15.59■□□□□ 0.09
VCANP13611 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
VCANP13611 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
VCANP13611 CFL1P6-201ENST00000400899 494 ntBASIC15.59■□□□□ 0.09
VCANP13611 RNLS-203ENST00000437752 525 ntTSL 2 BASIC15.59■□□□□ 0.09
VCANP13611 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC15.59■□□□□ 0.09
VCANP13611 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC15.59■□□□□ 0.09
VCANP13611 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC15.59■□□□□ 0.09
VCANP13611 AC021321.1-201ENST00000607397 1113 ntBASIC15.59■□□□□ 0.09
VCANP13611 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC15.59■□□□□ 0.09
VCANP13611 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
VCANP13611 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.59■□□□□ 0.09
VCANP13611 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
VCANP13611 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
VCANP13611 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.59■□□□□ 0.09
VCANP13611 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
VCANP13611 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
VCANP13611 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
VCANP13611 AC006449.5-201ENST00000610658 2098 ntBASIC15.59■□□□□ 0.09
VCANP13611 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
VCANP13611 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
VCANP13611 PAUPAR-201ENST00000630360 2965 ntBASIC15.59■□□□□ 0.09
VCANP13611 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
VCANP13611 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
VCANP13611 RNF212-201ENST00000333673 1019 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
VCANP13611 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC15.59■□□□□ 0.09
VCANP13611 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
VCANP13611 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
VCANP13611 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.59■□□□□ 0.09
VCANP13611 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
VCANP13611 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
VCANP13611 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.59■□□□□ 0.09
VCANP13611 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
VCANP13611 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
VCANP13611 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
VCANP13611 CST1-202ENST00000398402 655 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
VCANP13611 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC15.59■□□□□ 0.09
VCANP13611 FAM58BP-201ENST00000439056 645 ntBASIC15.59■□□□□ 0.09
VCANP13611 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC15.59■□□□□ 0.09
VCANP13611 TRAPPC2L-212ENST00000567312 499 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
VCANP13611 KRT17P4-206ENST00000584151 719 ntTSL 4 BASIC15.59■□□□□ 0.09
VCANP13611 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC15.59■□□□□ 0.09
VCANP13611 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
VCANP13611 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
VCANP13611 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.59■□□□□ 0.09
VCANP13611 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
VCANP13611 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
VCANP13611 SIGLEC6-204ENST00000391797 1391 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
VCANP13611 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
VCANP13611 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.58■□□□□ 0.09
VCANP13611 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.58■□□□□ 0.09
VCANP13611 TREM2-202ENST00000373113 1044 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
VCANP13611 AL512306.1-201ENST00000432698 848 ntBASIC15.58■□□□□ 0.09
VCANP13611 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC15.58■□□□□ 0.09
VCANP13611 SLC25A15P1-201ENST00000456738 342 ntBASIC15.58■□□□□ 0.09
VCANP13611 SLC25A15P3-201ENST00000505530 290 ntBASIC15.58■□□□□ 0.09
VCANP13611 BLOC1S5-205ENST00000543936 368 ntTSL 2 BASIC15.58■□□□□ 0.09
VCANP13611 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC15.58■□□□□ 0.09
VCANP13611 AC124947.2-201ENST00000547118 1133 ntBASIC15.58■□□□□ 0.09
VCANP13611 AP006248.1-201ENST00000610471 67 ntBASIC15.58■□□□□ 0.09
VCANP13611 MIR6893-201ENST00000613458 69 ntBASIC15.58■□□□□ 0.09
VCANP13611 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
VCANP13611 AC025183.3-201ENST00000623526 1482 ntBASIC15.58■□□□□ 0.09
VCANP13611 REXO1L5P-201ENST00000622260 2098 ntBASIC15.58■□□□□ 0.09
VCANP13611 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC15.58■□□□□ 0.09
VCANP13611 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
VCANP13611 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
VCANP13611 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
VCANP13611 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
VCANP13611 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.58■□□□□ 0.08
VCANP13611 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
VCANP13611 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.58■□□□□ 0.08
VCANP13611 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.58■□□□□ 0.08
VCANP13611 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
VCANP13611 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
VCANP13611 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC15.58■□□□□ 0.08
VCANP13611 LINC00824-204ENST00000520766 597 ntTSL 5 BASIC15.58■□□□□ 0.08
VCANP13611 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC15.58■□□□□ 0.08
VCANP13611 Z98259.2-201ENST00000641583 609 ntBASIC15.58■□□□□ 0.08
VCANP13611 LINC01815-202ENST00000641468 1409 ntBASIC15.58■□□□□ 0.08
VCANP13611 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
VCANP13611 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
VCANP13611 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC15.58■□□□□ 0.08
VCANP13611 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
VCANP13611 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
VCANP13611 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
VCANP13611 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
VCANP13611 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC15.58■□□□□ 0.08
VCANP13611 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
VCANP13611 FAM86B3P-203ENST00000523992 854 ntBASIC15.58■□□□□ 0.08
VCANP13611 AC009560.1-201ENST00000620208 434 ntBASIC15.58■□□□□ 0.08
VCANP13611 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.58■□□□□ 0.08
VCANP13611 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
VCANP13611 AC105020.1-201ENST00000435356 2205 ntBASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms