Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Tlr3Q99MB1 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Tlr3Q99MB1 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tlr3Q99MB1 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Tlr3Q99MB1 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tlr3Q99MB1 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tlr3Q99MB1 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Tlr3Q99MB1 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tlr3Q99MB1 Gm44207-201ENSMUST00000204568 1424 ntBASIC13.32□□□□□ -0.28
Tlr3Q99MB1 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tlr3Q99MB1 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Tlr3Q99MB1 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tlr3Q99MB1 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
Tlr3Q99MB1 Gm24255-201ENSMUST00000104481 128 ntBASIC13.32□□□□□ -0.28
Tlr3Q99MB1 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tlr3Q99MB1 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC13.32□□□□□ -0.28
Tlr3Q99MB1 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
Tlr3Q99MB1 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC13.32□□□□□ -0.28
Tlr3Q99MB1 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC13.32□□□□□ -0.28
Tlr3Q99MB1 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Tlr3Q99MB1 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tlr3Q99MB1 Gm25668-201ENSMUST00000157700 129 ntBASIC13.32□□□□□ -0.28
Tlr3Q99MB1 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
Tlr3Q99MB1 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Tlr3Q99MB1 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
Tlr3Q99MB1 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC13.32□□□□□ -0.28
Tlr3Q99MB1 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tlr3Q99MB1 Gm27023-201ENSMUST00000182372 285 ntBASIC13.32□□□□□ -0.28
Tlr3Q99MB1 Gm37201-201ENSMUST00000191845 523 ntBASIC13.32□□□□□ -0.28
Tlr3Q99MB1 Gm37259-201ENSMUST00000193903 849 ntBASIC13.32□□□□□ -0.28
Tlr3Q99MB1 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC13.32□□□□□ -0.28
Tlr3Q99MB1 Gm18753-201ENSMUST00000201000 566 ntBASIC13.32□□□□□ -0.28
Tlr3Q99MB1 Gm43868-201ENSMUST00000205187 2114 ntBASIC13.32□□□□□ -0.28
Tlr3Q99MB1 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tlr3Q99MB1 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC13.32□□□□□ -0.28
Tlr3Q99MB1 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tlr3Q99MB1 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Tlr3Q99MB1 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Tlr3Q99MB1 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC13.32□□□□□ -0.28
Tlr3Q99MB1 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tlr3Q99MB1 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Tlr3Q99MB1 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC13.32□□□□□ -0.28
Tlr3Q99MB1 Gm37737-201ENSMUST00000195013 1638 ntBASIC13.31□□□□□ -0.28
Tlr3Q99MB1 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tlr3Q99MB1 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tlr3Q99MB1 Gm44414-201ENSMUST00000203660 2109 ntBASIC13.31□□□□□ -0.28
Tlr3Q99MB1 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tlr3Q99MB1 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tlr3Q99MB1 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tlr3Q99MB1 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Tlr3Q99MB1 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tlr3Q99MB1 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Tlr3Q99MB1 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tlr3Q99MB1 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC13.31□□□□□ -0.28
Tlr3Q99MB1 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Tlr3Q99MB1 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tlr3Q99MB1 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Tlr3Q99MB1 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tlr3Q99MB1 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tlr3Q99MB1 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tlr3Q99MB1 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tlr3Q99MB1 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Tlr3Q99MB1 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tlr3Q99MB1 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tlr3Q99MB1 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC13.31□□□□□ -0.28
Tlr3Q99MB1 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Tlr3Q99MB1 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Tlr3Q99MB1 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tlr3Q99MB1 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tlr3Q99MB1 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tlr3Q99MB1 Gm8908-201ENSMUST00000121633 1024 ntBASIC13.31□□□□□ -0.28
Tlr3Q99MB1 Gm23119-201ENSMUST00000158610 140 ntBASIC13.31□□□□□ -0.28
Tlr3Q99MB1 AC098716.1-201ENSMUST00000213527 703 ntBASIC13.31□□□□□ -0.28
Tlr3Q99MB1 Gm6082-201ENSMUST00000215204 454 ntBASIC13.31□□□□□ -0.28
Tlr3Q99MB1 Gm39404-201ENSMUST00000216350 313 ntBASIC13.31□□□□□ -0.28
Tlr3Q99MB1 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tlr3Q99MB1 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tlr3Q99MB1 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Tlr3Q99MB1 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tlr3Q99MB1 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Tlr3Q99MB1 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tlr3Q99MB1 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tlr3Q99MB1 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Tlr3Q99MB1 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC13.31□□□□□ -0.28
Tlr3Q99MB1 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tlr3Q99MB1 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tlr3Q99MB1 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tlr3Q99MB1 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tlr3Q99MB1 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Tlr3Q99MB1 Gm43417-201ENSMUST00000201586 5207 ntBASIC13.31□□□□□ -0.28
Tlr3Q99MB1 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Tlr3Q99MB1 Gm45342-201ENSMUST00000210903 1363 ntBASIC13.31□□□□□ -0.28
Tlr3Q99MB1 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC13.31□□□□□ -0.28
Tlr3Q99MB1 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tlr3Q99MB1 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC13.3□□□□□ -0.28
Tlr3Q99MB1 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC13.3□□□□□ -0.28
Tlr3Q99MB1 Gm44260-201ENSMUST00000204946 2094 ntBASIC13.3□□□□□ -0.28
Tlr3Q99MB1 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Tlr3Q99MB1 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tlr3Q99MB1 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms