Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
SIPA1Q96FS4 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.51■□□□□ 0.07
SIPA1Q96FS4 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC15.51■□□□□ 0.07
SIPA1Q96FS4 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SIPA1Q96FS4 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.51■□□□□ 0.07
SIPA1Q96FS4 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SIPA1Q96FS4 AC008741.2-201ENST00000612792 3115 ntBASIC15.51■□□□□ 0.07
SIPA1Q96FS4 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
SIPA1Q96FS4 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
SIPA1Q96FS4 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.51■□□□□ 0.07
SIPA1Q96FS4 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
SIPA1Q96FS4 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SIPA1Q96FS4 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
SIPA1Q96FS4 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SIPA1Q96FS4 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SIPA1Q96FS4 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SIPA1Q96FS4 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
SIPA1Q96FS4 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
SIPA1Q96FS4 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
SIPA1Q96FS4 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.5■□□□□ 0.07
SIPA1Q96FS4 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SIPA1Q96FS4 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
SIPA1Q96FS4 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SIPA1Q96FS4 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SIPA1Q96FS4 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC15.5■□□□□ 0.07
SIPA1Q96FS4 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SIPA1Q96FS4 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SIPA1Q96FS4 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.5■□□□□ 0.07
SIPA1Q96FS4 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SIPA1Q96FS4 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.5■□□□□ 0.07
SIPA1Q96FS4 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SIPA1Q96FS4 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SIPA1Q96FS4 RNU1-114P-201ENST00000365297 166 ntBASIC15.5■□□□□ 0.07
SIPA1Q96FS4 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
SIPA1Q96FS4 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC15.5■□□□□ 0.07
SIPA1Q96FS4 ACTBP8-201ENST00000403258 1108 ntBASIC15.5■□□□□ 0.07
SIPA1Q96FS4 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SIPA1Q96FS4 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC15.5■□□□□ 0.07
SIPA1Q96FS4 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
SIPA1Q96FS4 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC15.5■□□□□ 0.07
SIPA1Q96FS4 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.5■□□□□ 0.07
SIPA1Q96FS4 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SIPA1Q96FS4 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC15.5■□□□□ 0.07
SIPA1Q96FS4 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SIPA1Q96FS4 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
SIPA1Q96FS4 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC15.5■□□□□ 0.07
SIPA1Q96FS4 INO80C-210ENST00000590757 595 ntTSL 2 BASIC15.5■□□□□ 0.07
SIPA1Q96FS4 AC243960.2-201ENST00000600996 747 ntBASIC15.5■□□□□ 0.07
SIPA1Q96FS4 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC15.5■□□□□ 0.07
SIPA1Q96FS4 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SIPA1Q96FS4 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SIPA1Q96FS4 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.5■□□□□ 0.07
SIPA1Q96FS4 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
SIPA1Q96FS4 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.5■□□□□ 0.07
SIPA1Q96FS4 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.5■□□□□ 0.07
SIPA1Q96FS4 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SIPA1Q96FS4 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
SIPA1Q96FS4 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
SIPA1Q96FS4 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
SIPA1Q96FS4 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.5■□□□□ 0.07
SIPA1Q96FS4 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SIPA1Q96FS4 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SIPA1Q96FS4 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SIPA1Q96FS4 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SIPA1Q96FS4 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
SIPA1Q96FS4 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SIPA1Q96FS4 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SIPA1Q96FS4 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.49■□□□□ 0.07
SIPA1Q96FS4 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SIPA1Q96FS4 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
SIPA1Q96FS4 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
SIPA1Q96FS4 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SIPA1Q96FS4 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SIPA1Q96FS4 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SIPA1Q96FS4 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC15.49■□□□□ 0.07
SIPA1Q96FS4 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
SIPA1Q96FS4 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
SIPA1Q96FS4 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SIPA1Q96FS4 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SIPA1Q96FS4 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SIPA1Q96FS4 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SIPA1Q96FS4 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC15.49■□□□□ 0.07
SIPA1Q96FS4 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC15.49■□□□□ 0.07
SIPA1Q96FS4 AC099548.2-209ENST00000480264 625 ntBASIC15.49■□□□□ 0.07
SIPA1Q96FS4 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC15.49■□□□□ 0.07
SIPA1Q96FS4 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SIPA1Q96FS4 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC15.49■□□□□ 0.07
SIPA1Q96FS4 AC103810.3-201ENST00000583567 96 ntBASIC15.49■□□□□ 0.07
SIPA1Q96FS4 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC15.49■□□□□ 0.07
SIPA1Q96FS4 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC15.49■□□□□ 0.07
SIPA1Q96FS4 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC15.49■□□□□ 0.07
SIPA1Q96FS4 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SIPA1Q96FS4 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SIPA1Q96FS4 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SIPA1Q96FS4 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.49■□□□□ 0.07
SIPA1Q96FS4 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC15.49■□□□□ 0.07
SIPA1Q96FS4 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
SIPA1Q96FS4 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.49■□□□□ 0.07
SIPA1Q96FS4 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SIPA1Q96FS4 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms