Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
VPS13DQ5THJ4 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
VPS13DQ5THJ4 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
VPS13DQ5THJ4 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
VPS13DQ5THJ4 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
VPS13DQ5THJ4 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
VPS13DQ5THJ4 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
VPS13DQ5THJ4 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
VPS13DQ5THJ4 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
VPS13DQ5THJ4 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC10.1□□□□□ -0.79
VPS13DQ5THJ4 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
VPS13DQ5THJ4 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC10.1□□□□□ -0.79
VPS13DQ5THJ4 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
VPS13DQ5THJ4 AC127024.7-201ENST00000625101 200 ntBASIC10.1□□□□□ -0.79
VPS13DQ5THJ4 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
VPS13DQ5THJ4 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC10.1□□□□□ -0.79
VPS13DQ5THJ4 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
VPS13DQ5THJ4 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
VPS13DQ5THJ4 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
VPS13DQ5THJ4 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
VPS13DQ5THJ4 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC10.1□□□□□ -0.79
VPS13DQ5THJ4 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
VPS13DQ5THJ4 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC10.1□□□□□ -0.79
VPS13DQ5THJ4 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC10.1□□□□□ -0.79
VPS13DQ5THJ4 AC026320.2-201ENST00000434379 478 ntBASIC10.1□□□□□ -0.79
VPS13DQ5THJ4 AL353637.1-201ENST00000451571 732 ntBASIC10.1□□□□□ -0.79
VPS13DQ5THJ4 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC10.1□□□□□ -0.79
VPS13DQ5THJ4 AP000911.2-201ENST00000534330 502 ntBASIC10.1□□□□□ -0.79
VPS13DQ5THJ4 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
VPS13DQ5THJ4 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC10.1□□□□□ -0.79
VPS13DQ5THJ4 AC008825.2-201ENST00000603374 718 ntBASIC10.1□□□□□ -0.79
VPS13DQ5THJ4 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
VPS13DQ5THJ4 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC10.09□□□□□ -0.79
VPS13DQ5THJ4 ZBTB45P1-201ENST00000452761 1456 ntBASIC10.09□□□□□ -0.79
VPS13DQ5THJ4 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
VPS13DQ5THJ4 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
VPS13DQ5THJ4 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC10.09□□□□□ -0.79
VPS13DQ5THJ4 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC10.09□□□□□ -0.79
VPS13DQ5THJ4 AC112693.3-201ENST00000624819 1983 ntBASIC10.09□□□□□ -0.79
VPS13DQ5THJ4 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
VPS13DQ5THJ4 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
VPS13DQ5THJ4 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
VPS13DQ5THJ4 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
VPS13DQ5THJ4 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
VPS13DQ5THJ4 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
VPS13DQ5THJ4 AP000356.3-201ENST00000382243 753 ntBASIC10.09□□□□□ -0.79
VPS13DQ5THJ4 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC10.09□□□□□ -0.79
VPS13DQ5THJ4 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
VPS13DQ5THJ4 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC10.09□□□□□ -0.79
VPS13DQ5THJ4 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC10.09□□□□□ -0.79
VPS13DQ5THJ4 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC10.09□□□□□ -0.79
VPS13DQ5THJ4 AC131206.1-201ENST00000538078 1211 ntBASIC10.09□□□□□ -0.79
VPS13DQ5THJ4 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC10.09□□□□□ -0.79
VPS13DQ5THJ4 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC10.09□□□□□ -0.79
VPS13DQ5THJ4 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC10.09□□□□□ -0.79
VPS13DQ5THJ4 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC10.09□□□□□ -0.79
VPS13DQ5THJ4 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
VPS13DQ5THJ4 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC10.09□□□□□ -0.79
VPS13DQ5THJ4 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
VPS13DQ5THJ4 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
VPS13DQ5THJ4 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
VPS13DQ5THJ4 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
VPS13DQ5THJ4 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
VPS13DQ5THJ4 AL512430.1-201ENST00000392575 860 ntBASIC10.09□□□□□ -0.79
VPS13DQ5THJ4 AL133466.1-201ENST00000447582 150 ntBASIC10.09□□□□□ -0.79
VPS13DQ5THJ4 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
VPS13DQ5THJ4 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC10.09□□□□□ -0.79
VPS13DQ5THJ4 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC10.09□□□□□ -0.79
VPS13DQ5THJ4 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC10.09□□□□□ -0.79
VPS13DQ5THJ4 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC10.09□□□□□ -0.79
VPS13DQ5THJ4 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
VPS13DQ5THJ4 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
VPS13DQ5THJ4 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC10.09□□□□□ -0.79
VPS13DQ5THJ4 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC10.09□□□□□ -0.79
VPS13DQ5THJ4 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
VPS13DQ5THJ4 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC10.09□□□□□ -0.79
VPS13DQ5THJ4 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
VPS13DQ5THJ4 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
VPS13DQ5THJ4 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
VPS13DQ5THJ4 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC10.09□□□□□ -0.79
VPS13DQ5THJ4 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
VPS13DQ5THJ4 TSPY25P-201ENST00000429463 745 ntBASIC10.09□□□□□ -0.79
VPS13DQ5THJ4 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC10.09□□□□□ -0.79
VPS13DQ5THJ4 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC10.09□□□□□ -0.79
VPS13DQ5THJ4 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC10.09□□□□□ -0.79
VPS13DQ5THJ4 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
VPS13DQ5THJ4 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
VPS13DQ5THJ4 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC10.09□□□□□ -0.79
VPS13DQ5THJ4 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
VPS13DQ5THJ4 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
VPS13DQ5THJ4 CYP2T1P-202ENST00000641596 2535 ntBASIC10.08□□□□□ -0.8
VPS13DQ5THJ4 IL9RP3-201ENST00000442856 1674 ntBASIC10.08□□□□□ -0.8
VPS13DQ5THJ4 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
VPS13DQ5THJ4 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
VPS13DQ5THJ4 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC10.08□□□□□ -0.8
VPS13DQ5THJ4 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
VPS13DQ5THJ4 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC10.08□□□□□ -0.8
VPS13DQ5THJ4 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC10.08□□□□□ -0.8
VPS13DQ5THJ4 RPL18AP3-201ENST00000462885 528 ntBASIC10.08□□□□□ -0.8
VPS13DQ5THJ4 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC10.08□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 128.6 ms