Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
APOC4P55056 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
APOC4P55056 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
APOC4P55056 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
APOC4P55056 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
APOC4P55056 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
APOC4P55056 AC134312.5-201ENST00000568031 1313 ntBASIC11.35□□□□□ -0.59
APOC4P55056 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
APOC4P55056 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
APOC4P55056 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
APOC4P55056 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
APOC4P55056 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC11.34□□□□□ -0.59
APOC4P55056 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
APOC4P55056 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
APOC4P55056 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
APOC4P55056 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
APOC4P55056 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
APOC4P55056 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
APOC4P55056 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC11.34□□□□□ -0.59
APOC4P55056 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
APOC4P55056 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
APOC4P55056 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
APOC4P55056 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
APOC4P55056 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
APOC4P55056 AL138799.1-201ENST00000448213 1675 ntBASIC11.34□□□□□ -0.59
APOC4P55056 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
APOC4P55056 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
APOC4P55056 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC11.34□□□□□ -0.59
APOC4P55056 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC11.34□□□□□ -0.59
APOC4P55056 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
APOC4P55056 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
APOC4P55056 PGGT1BP2-201ENST00000398621 1028 ntBASIC11.34□□□□□ -0.59
APOC4P55056 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC11.34□□□□□ -0.59
APOC4P55056 TMEM14DP-201ENST00000422205 345 ntBASIC11.34□□□□□ -0.59
APOC4P55056 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC11.34□□□□□ -0.59
APOC4P55056 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC11.34□□□□□ -0.59
APOC4P55056 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
APOC4P55056 AC012441.1-201ENST00000446669 685 ntBASIC11.34□□□□□ -0.59
APOC4P55056 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC11.34□□□□□ -0.59
APOC4P55056 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC11.34□□□□□ -0.59
APOC4P55056 PFN2-205ENST00000461868 613 ntTSL 2 BASIC11.34□□□□□ -0.59
APOC4P55056 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC11.34□□□□□ -0.59
APOC4P55056 AC004066.1-201ENST00000502488 802 ntBASIC11.34□□□□□ -0.59
APOC4P55056 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC11.34□□□□□ -0.59
APOC4P55056 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC11.34□□□□□ -0.59
APOC4P55056 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC11.34□□□□□ -0.59
APOC4P55056 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC11.34□□□□□ -0.59
APOC4P55056 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC11.34□□□□□ -0.59
APOC4P55056 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC11.34□□□□□ -0.59
APOC4P55056 AC025181.2-201ENST00000606994 802 ntBASIC11.34□□□□□ -0.59
APOC4P55056 AP005019.2-201ENST00000615104 511 ntBASIC11.34□□□□□ -0.59
APOC4P55056 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC11.34□□□□□ -0.59
APOC4P55056 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
APOC4P55056 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
APOC4P55056 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
APOC4P55056 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC11.34□□□□□ -0.59
APOC4P55056 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
APOC4P55056 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
APOC4P55056 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
APOC4P55056 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
APOC4P55056 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC11.34□□□□□ -0.59
APOC4P55056 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
APOC4P55056 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
APOC4P55056 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
APOC4P55056 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
APOC4P55056 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
APOC4P55056 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
APOC4P55056 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC11.34□□□□□ -0.59
APOC4P55056 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC11.34□□□□□ -0.59
APOC4P55056 SUPT20HL2-201ENST00000486479 2409 ntBASIC11.34□□□□□ -0.59
APOC4P55056 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC11.34□□□□□ -0.59
APOC4P55056 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
APOC4P55056 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
APOC4P55056 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
APOC4P55056 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
APOC4P55056 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
APOC4P55056 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
APOC4P55056 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
APOC4P55056 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
APOC4P55056 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC11.33□□□□□ -0.6
APOC4P55056 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
APOC4P55056 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
APOC4P55056 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
APOC4P55056 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
APOC4P55056 PCDHB19P-201ENST00000570871 2371 ntBASIC11.33□□□□□ -0.6
APOC4P55056 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
APOC4P55056 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
APOC4P55056 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
APOC4P55056 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
APOC4P55056 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
APOC4P55056 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
APOC4P55056 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
APOC4P55056 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC11.33□□□□□ -0.6
APOC4P55056 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
APOC4P55056 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
APOC4P55056 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
APOC4P55056 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC11.33□□□□□ -0.6
APOC4P55056 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
APOC4P55056 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
APOC4P55056 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms