Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 AL589987.1-201ENST00000453380 819 ntBASIC15.81■□□□□ 0.12
PTCD2Q8WV60 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC15.81■□□□□ 0.12
PTCD2Q8WV60 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
PTCD2Q8WV60 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC15.81■□□□□ 0.12
PTCD2Q8WV60 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PTCD2Q8WV60 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC15.81■□□□□ 0.12
PTCD2Q8WV60 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC15.81■□□□□ 0.12
PTCD2Q8WV60 AC135586.1-201ENST00000539323 574 ntBASIC15.81■□□□□ 0.12
PTCD2Q8WV60 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.81■□□□□ 0.12
PTCD2Q8WV60 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC15.81■□□□□ 0.12
PTCD2Q8WV60 CLIC4P2-201ENST00000601934 717 ntBASIC15.81■□□□□ 0.12
PTCD2Q8WV60 RNA5-8SN1-201ENST00000610460 153 ntBASIC15.81■□□□□ 0.12
PTCD2Q8WV60 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC15.81■□□□□ 0.12
PTCD2Q8WV60 TEX48-202ENST00000612244 662 ntTSL 3 BASIC15.81■□□□□ 0.12
PTCD2Q8WV60 RNA5-8SN5-202ENST00000612463 153 ntBASIC15.81■□□□□ 0.12
PTCD2Q8WV60 RNA5-8SN4-201ENST00000613359 153 ntBASIC15.81■□□□□ 0.12
PTCD2Q8WV60 RNA5-8SN5-201ENST00000619471 153 ntBASIC15.81■□□□□ 0.12
PTCD2Q8WV60 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
PTCD2Q8WV60 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
PTCD2Q8WV60 AL109936.8-201ENST00000641772 604 ntBASIC15.81■□□□□ 0.12
PTCD2Q8WV60 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PTCD2Q8WV60 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PTCD2Q8WV60 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.81■□□□□ 0.12
PTCD2Q8WV60 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
PTCD2Q8WV60 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
PTCD2Q8WV60 AC144831.1-201ENST00000573312 2656 ntBASIC15.81■□□□□ 0.12
PTCD2Q8WV60 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
PTCD2Q8WV60 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTCD2Q8WV60 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.8■□□□□ 0.12
PTCD2Q8WV60 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PTCD2Q8WV60 Z97205.2-201ENST00000564697 1639 ntBASIC15.8■□□□□ 0.12
PTCD2Q8WV60 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
PTCD2Q8WV60 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC15.8■□□□□ 0.12
PTCD2Q8WV60 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.8■□□□□ 0.12
PTCD2Q8WV60 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTCD2Q8WV60 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
PTCD2Q8WV60 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PTCD2Q8WV60 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC15.8■□□□□ 0.12
PTCD2Q8WV60 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTCD2Q8WV60 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTCD2Q8WV60 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTCD2Q8WV60 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC15.8■□□□□ 0.12
PTCD2Q8WV60 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PTCD2Q8WV60 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC15.8■□□□□ 0.12
PTCD2Q8WV60 AC015922.1-201ENST00000421102 1152 ntBASIC15.8■□□□□ 0.12
PTCD2Q8WV60 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC15.8■□□□□ 0.12
PTCD2Q8WV60 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC15.8■□□□□ 0.12
PTCD2Q8WV60 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC15.8■□□□□ 0.12
PTCD2Q8WV60 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PTCD2Q8WV60 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC15.8■□□□□ 0.12
PTCD2Q8WV60 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC15.8■□□□□ 0.12
PTCD2Q8WV60 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC15.8■□□□□ 0.12
PTCD2Q8WV60 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.8■□□□□ 0.12
PTCD2Q8WV60 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.8■□□□□ 0.12
PTCD2Q8WV60 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC15.8■□□□□ 0.12
PTCD2Q8WV60 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC15.8■□□□□ 0.12
PTCD2Q8WV60 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC15.8■□□□□ 0.12
PTCD2Q8WV60 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC15.8■□□□□ 0.12
PTCD2Q8WV60 AC022079.1-201ENST00000621546 602 ntBASIC15.8■□□□□ 0.12
PTCD2Q8WV60 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC15.8■□□□□ 0.12
PTCD2Q8WV60 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
PTCD2Q8WV60 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTCD2Q8WV60 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
PTCD2Q8WV60 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.8■□□□□ 0.12
PTCD2Q8WV60 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PTCD2Q8WV60 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PTCD2Q8WV60 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTCD2Q8WV60 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTCD2Q8WV60 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
PTCD2Q8WV60 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
PTCD2Q8WV60 FLJ16779-201ENST00000612722 7638 ntBASIC15.79■□□□□ 0.12
PTCD2Q8WV60 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.79■□□□□ 0.12
PTCD2Q8WV60 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
PTCD2Q8WV60 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PTCD2Q8WV60 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PTCD2Q8WV60 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PTCD2Q8WV60 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PTCD2Q8WV60 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
PTCD2Q8WV60 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.79■□□□□ 0.12
PTCD2Q8WV60 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PTCD2Q8WV60 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
PTCD2Q8WV60 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PTCD2Q8WV60 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.79■□□□□ 0.12
PTCD2Q8WV60 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PTCD2Q8WV60 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.79■□□□□ 0.12
PTCD2Q8WV60 AC073310.1-201ENST00000423226 1033 ntBASIC15.79■□□□□ 0.12
PTCD2Q8WV60 RASL12-203ENST00000434605 982 ntTSL 2 BASIC15.79■□□□□ 0.12
PTCD2Q8WV60 SLED1-202ENST00000512051 380 ntBASIC15.79■□□□□ 0.12
PTCD2Q8WV60 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC15.79■□□□□ 0.12
PTCD2Q8WV60 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC15.79■□□□□ 0.12
PTCD2Q8WV60 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC15.79■□□□□ 0.12
PTCD2Q8WV60 ZNF890P-202ENST00000530367 1156 ntBASIC15.79■□□□□ 0.12
PTCD2Q8WV60 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.79■□□□□ 0.12
PTCD2Q8WV60 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC15.79■□□□□ 0.12
PTCD2Q8WV60 AC079414.2-201ENST00000567157 1104 ntBASIC15.79■□□□□ 0.12
PTCD2Q8WV60 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
PTCD2Q8WV60 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.79■□□□□ 0.12
PTCD2Q8WV60 AL109924.4-201ENST00000623089 670 ntBASIC15.79■□□□□ 0.12
PTCD2Q8WV60 AC004461.2-201ENST00000629517 803 ntBASIC15.79■□□□□ 0.12
PTCD2Q8WV60 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms