Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SLC52A1Q9NWF4 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
SLC52A1Q9NWF4 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SLC52A1Q9NWF4 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
SLC52A1Q9NWF4 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
SLC52A1Q9NWF4 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
SLC52A1Q9NWF4 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SLC52A1Q9NWF4 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SLC52A1Q9NWF4 MVK-214ENST00000629016 1591 ntTSL 5 BASIC21.79■■□□□ 1.08
SLC52A1Q9NWF4 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SLC52A1Q9NWF4 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SLC52A1Q9NWF4 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SLC52A1Q9NWF4 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
SLC52A1Q9NWF4 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC21.79■■□□□ 1.08
SLC52A1Q9NWF4 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC21.79■■□□□ 1.08
SLC52A1Q9NWF4 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC21.79■■□□□ 1.08
SLC52A1Q9NWF4 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC21.79■■□□□ 1.08
SLC52A1Q9NWF4 AC132192.2-201ENST00000596206 1147 ntBASIC21.79■■□□□ 1.08
SLC52A1Q9NWF4 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC21.79■■□□□ 1.08
SLC52A1Q9NWF4 AC073352.2-201ENST00000609385 439 ntBASIC21.79■■□□□ 1.08
SLC52A1Q9NWF4 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC21.79■■□□□ 1.08
SLC52A1Q9NWF4 AC103691.2-201ENST00000618824 433 ntBASIC21.79■■□□□ 1.08
SLC52A1Q9NWF4 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SLC52A1Q9NWF4 MST1L-201ENST00000442552 2185 ntBASIC21.79■■□□□ 1.08
SLC52A1Q9NWF4 AL157414.3-201ENST00000624276 1954 ntBASIC21.79■■□□□ 1.08
SLC52A1Q9NWF4 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
SLC52A1Q9NWF4 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC21.79■■□□□ 1.08
SLC52A1Q9NWF4 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SLC52A1Q9NWF4 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SLC52A1Q9NWF4 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SLC52A1Q9NWF4 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC21.79■■□□□ 1.08
SLC52A1Q9NWF4 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC21.78■■□□□ 1.08
SLC52A1Q9NWF4 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
SLC52A1Q9NWF4 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SLC52A1Q9NWF4 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC21.78■■□□□ 1.08
SLC52A1Q9NWF4 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SLC52A1Q9NWF4 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SLC52A1Q9NWF4 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SLC52A1Q9NWF4 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SLC52A1Q9NWF4 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SLC52A1Q9NWF4 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
SLC52A1Q9NWF4 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SLC52A1Q9NWF4 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SLC52A1Q9NWF4 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SLC52A1Q9NWF4 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
SLC52A1Q9NWF4 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC21.78■■□□□ 1.08
SLC52A1Q9NWF4 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SLC52A1Q9NWF4 HNRNPA1P41-201ENST00000397777 928 ntBASIC21.78■■□□□ 1.08
SLC52A1Q9NWF4 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC21.78■■□□□ 1.08
SLC52A1Q9NWF4 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC21.78■■□□□ 1.08
SLC52A1Q9NWF4 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC21.78■■□□□ 1.08
SLC52A1Q9NWF4 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC21.78■■□□□ 1.08
SLC52A1Q9NWF4 RTN3P1-201ENST00000536295 711 ntBASIC21.78■■□□□ 1.08
SLC52A1Q9NWF4 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC21.78■■□□□ 1.08
SLC52A1Q9NWF4 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SLC52A1Q9NWF4 AC012044.1-201ENST00000603431 297 ntBASIC21.78■■□□□ 1.08
SLC52A1Q9NWF4 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC21.78■■□□□ 1.08
SLC52A1Q9NWF4 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
SLC52A1Q9NWF4 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SLC52A1Q9NWF4 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SLC52A1Q9NWF4 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SLC52A1Q9NWF4 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SLC52A1Q9NWF4 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SLC52A1Q9NWF4 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SLC52A1Q9NWF4 AC026471.1-201ENST00000564629 3026 ntBASIC21.77■■□□□ 1.08
SLC52A1Q9NWF4 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
SLC52A1Q9NWF4 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SLC52A1Q9NWF4 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC21.77■■□□□ 1.08
SLC52A1Q9NWF4 AC011840.2-201ENST00000563063 1520 ntBASIC21.77■■□□□ 1.08
SLC52A1Q9NWF4 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SLC52A1Q9NWF4 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
SLC52A1Q9NWF4 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SLC52A1Q9NWF4 RN7SKP230-201ENST00000365642 335 ntBASIC21.77■■□□□ 1.08
SLC52A1Q9NWF4 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SLC52A1Q9NWF4 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SLC52A1Q9NWF4 AC012441.2-201ENST00000444843 739 ntBASIC21.77■■□□□ 1.08
SLC52A1Q9NWF4 RCC2P8-201ENST00000502779 1035 ntBASIC21.77■■□□□ 1.08
SLC52A1Q9NWF4 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC21.77■■□□□ 1.08
SLC52A1Q9NWF4 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC21.77■■□□□ 1.08
SLC52A1Q9NWF4 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC21.77■■□□□ 1.08
SLC52A1Q9NWF4 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
SLC52A1Q9NWF4 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SLC52A1Q9NWF4 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC21.77■■□□□ 1.08
SLC52A1Q9NWF4 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SLC52A1Q9NWF4 CDK7-214ENST00000626796 358 ntTSL 5 BASIC21.77■■□□□ 1.08
SLC52A1Q9NWF4 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC21.77■■□□□ 1.08
SLC52A1Q9NWF4 NAP1L6-202ENST00000641404 1222 ntBASIC21.77■■□□□ 1.08
SLC52A1Q9NWF4 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SLC52A1Q9NWF4 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
SLC52A1Q9NWF4 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SLC52A1Q9NWF4 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
SLC52A1Q9NWF4 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SLC52A1Q9NWF4 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
SLC52A1Q9NWF4 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
SLC52A1Q9NWF4 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC21.76■■□□□ 1.07
SLC52A1Q9NWF4 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
SLC52A1Q9NWF4 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
SLC52A1Q9NWF4 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SLC52A1Q9NWF4 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SLC52A1Q9NWF4 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms