Protein–RNA interactions for Protein: Q53HL2

CDCA8, Borealin, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8Q53HL2 AC112693.3-201ENST00000624819 1983 ntBASIC21.27■■□□□ 1
CDCA8Q53HL2 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
CDCA8Q53HL2 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
CDCA8Q53HL2 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
CDCA8Q53HL2 LSM5-207ENST00000410044 687 ntTSL 3 BASIC21.27■■□□□ 1
CDCA8Q53HL2 C2orf27AP3-201ENST00000434123 579 ntBASIC21.27■■□□□ 1
CDCA8Q53HL2 AC022210.1-201ENST00000449856 793 ntBASIC21.27■■□□□ 1
CDCA8Q53HL2 CROCCP4-201ENST00000457096 498 ntBASIC21.27■■□□□ 1
CDCA8Q53HL2 AC007551.1-201ENST00000457394 519 ntBASIC21.27■■□□□ 1
CDCA8Q53HL2 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
CDCA8Q53HL2 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC21.27■■□□□ 1
CDCA8Q53HL2 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
CDCA8Q53HL2 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC21.27■■□□□ 1
CDCA8Q53HL2 GNRHR2-203ENST00000581100 1187 ntBASIC21.27■■□□□ 1
CDCA8Q53HL2 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC21.27■■□□□ 1
CDCA8Q53HL2 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC21.27■■□□□ 1
CDCA8Q53HL2 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC21.27■■□□□ 1
CDCA8Q53HL2 AL354718.3-201ENST00000616414 581 ntBASIC21.27■■□□□ 1
CDCA8Q53HL2 CR382287.1-201ENST00000623954 586 ntBASIC21.27■■□□□ 1
CDCA8Q53HL2 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC21.27■■□□□ 1
CDCA8Q53HL2 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
CDCA8Q53HL2 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CDCA8Q53HL2 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CDCA8Q53HL2 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC21.27■■□□□ 1
CDCA8Q53HL2 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC21.27■□□□□ 0.99
CDCA8Q53HL2 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CDCA8Q53HL2 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC21.27■□□□□ 0.99
CDCA8Q53HL2 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CDCA8Q53HL2 BID-213ENST00000615414 2236 ntTSL 5 BASIC21.27■□□□□ 0.99
CDCA8Q53HL2 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CDCA8Q53HL2 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDCA8Q53HL2 AC012508.2-201ENST00000567613 1472 ntBASIC21.26■□□□□ 0.99
CDCA8Q53HL2 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDCA8Q53HL2 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDCA8Q53HL2 GUK1-206ENST00000366723 845 ntTSL 5 BASIC21.26■□□□□ 0.99
CDCA8Q53HL2 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDCA8Q53HL2 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
CDCA8Q53HL2 GZMB-202ENST00000382540 816 ntTSL 5 BASIC21.26■□□□□ 0.99
CDCA8Q53HL2 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
CDCA8Q53HL2 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDCA8Q53HL2 MIR1909-201ENST00000411312 80 ntBASIC21.26■□□□□ 0.99
CDCA8Q53HL2 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CDCA8Q53HL2 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC21.26■□□□□ 0.99
CDCA8Q53HL2 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
CDCA8Q53HL2 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC21.26■□□□□ 0.99
CDCA8Q53HL2 AP000812.2-201ENST00000538934 718 ntBASIC21.26■□□□□ 0.99
CDCA8Q53HL2 AP005482.1-201ENST00000563722 1273 ntBASIC21.26■□□□□ 0.99
CDCA8Q53HL2 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC21.26■□□□□ 0.99
CDCA8Q53HL2 AC025279.2-201ENST00000569730 653 ntBASIC21.26■□□□□ 0.99
CDCA8Q53HL2 IFT20-216ENST00000588477 774 ntTSL 5 BASIC21.26■□□□□ 0.99
CDCA8Q53HL2 AC145423.3-201ENST00000615987 467 ntBASIC21.26■□□□□ 0.99
CDCA8Q53HL2 AC132938.4-201ENST00000623835 848 ntBASIC21.26■□□□□ 0.99
CDCA8Q53HL2 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC21.26■□□□□ 0.99
CDCA8Q53HL2 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDCA8Q53HL2 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
CDCA8Q53HL2 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
CDCA8Q53HL2 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDCA8Q53HL2 CICP11-201ENST00000434745 2827 ntBASIC21.26■□□□□ 0.99
CDCA8Q53HL2 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDCA8Q53HL2 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CDCA8Q53HL2 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDCA8Q53HL2 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
CDCA8Q53HL2 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CDCA8Q53HL2 AC148477.4-201ENST00000613430 1793 ntBASIC21.25■□□□□ 0.99
CDCA8Q53HL2 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC21.25■□□□□ 0.99
CDCA8Q53HL2 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CDCA8Q53HL2 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
CDCA8Q53HL2 PDIA3P1-201ENST00000471856 1510 ntBASIC21.25■□□□□ 0.99
CDCA8Q53HL2 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDCA8Q53HL2 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDCA8Q53HL2 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CDCA8Q53HL2 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC21.25■□□□□ 0.99
CDCA8Q53HL2 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDCA8Q53HL2 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CDCA8Q53HL2 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC21.25■□□□□ 0.99
CDCA8Q53HL2 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CDCA8Q53HL2 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC21.25■□□□□ 0.99
CDCA8Q53HL2 FTH1P14-201ENST00000482930 551 ntBASIC21.25■□□□□ 0.99
CDCA8Q53HL2 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC21.25■□□□□ 0.99
CDCA8Q53HL2 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC21.25■□□□□ 0.99
CDCA8Q53HL2 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC21.25■□□□□ 0.99
CDCA8Q53HL2 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC21.25■□□□□ 0.99
CDCA8Q53HL2 AC136621.1-201ENST00000624017 2304 ntBASIC21.25■□□□□ 0.99
CDCA8Q53HL2 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC21.25■□□□□ 0.99
CDCA8Q53HL2 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDCA8Q53HL2 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
CDCA8Q53HL2 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CDCA8Q53HL2 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CDCA8Q53HL2 AL138709.1-201ENST00000614840 1693 ntBASIC21.24■□□□□ 0.99
CDCA8Q53HL2 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CDCA8Q53HL2 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
CDCA8Q53HL2 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CDCA8Q53HL2 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDCA8Q53HL2 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CDCA8Q53HL2 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC21.24■□□□□ 0.99
CDCA8Q53HL2 C18orf15-201ENST00000623680 2534 ntBASIC21.24■□□□□ 0.99
CDCA8Q53HL2 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDCA8Q53HL2 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CDCA8Q53HL2 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDCA8Q53HL2 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms